Protein–RNA interactions for Protein: O88958

Gnpda1, Glucosamine-6-phosphate isomerase 1, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gnpda1O88958 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gnpda1O88958 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gnpda1O88958 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gnpda1O88958 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gnpda1O88958 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Gnpda1O88958 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gnpda1O88958 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gnpda1O88958 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gnpda1O88958 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.22■□□□□ 0.67
Gnpda1O88958 Gm6139-201ENSMUST00000079261 882 ntBASIC19.22■□□□□ 0.67
Gnpda1O88958 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.22■□□□□ 0.67
Gnpda1O88958 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gnpda1O88958 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gnpda1O88958 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gnpda1O88958 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gnpda1O88958 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gnpda1O88958 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gnpda1O88958 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Gnpda1O88958 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gnpda1O88958 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Gnpda1O88958 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gnpda1O88958 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gnpda1O88958 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.21■□□□□ 0.67
Gnpda1O88958 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gnpda1O88958 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
Gnpda1O88958 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gnpda1O88958 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Gnpda1O88958 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Gnpda1O88958 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gnpda1O88958 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Gnpda1O88958 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gnpda1O88958 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Gnpda1O88958 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Gnpda1O88958 Gm8493-201ENSMUST00000196881 489 ntBASIC19.2■□□□□ 0.66
Gnpda1O88958 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gnpda1O88958 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gnpda1O88958 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gnpda1O88958 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gnpda1O88958 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gnpda1O88958 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gnpda1O88958 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Gnpda1O88958 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Gnpda1O88958 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.19■□□□□ 0.66
Gnpda1O88958 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.19■□□□□ 0.66
Gnpda1O88958 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gnpda1O88958 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gnpda1O88958 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gnpda1O88958 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Gnpda1O88958 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gnpda1O88958 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gnpda1O88958 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gnpda1O88958 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gnpda1O88958 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.18■□□□□ 0.66
Gnpda1O88958 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gnpda1O88958 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gnpda1O88958 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Gnpda1O88958 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gnpda1O88958 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gnpda1O88958 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.18■□□□□ 0.66
Gnpda1O88958 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gnpda1O88958 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Gnpda1O88958 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gnpda1O88958 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gnpda1O88958 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gnpda1O88958 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gnpda1O88958 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gnpda1O88958 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.17■□□□□ 0.66
Gnpda1O88958 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Gnpda1O88958 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Gnpda1O88958 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Gnpda1O88958 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gnpda1O88958 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.16■□□□□ 0.66
Gnpda1O88958 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gnpda1O88958 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gnpda1O88958 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Gnpda1O88958 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gnpda1O88958 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gnpda1O88958 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gnpda1O88958 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.16■□□□□ 0.66
Gnpda1O88958 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Gnpda1O88958 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gnpda1O88958 Gm43017-201ENSMUST00000198296 752 ntBASIC19.16■□□□□ 0.66
Gnpda1O88958 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Gnpda1O88958 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Gnpda1O88958 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gnpda1O88958 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gnpda1O88958 Golph3-202ENSMUST00000226517 2359 ntBASIC19.15■□□□□ 0.66
Gnpda1O88958 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gnpda1O88958 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gnpda1O88958 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gnpda1O88958 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gnpda1O88958 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gnpda1O88958 Gm12251-201ENSMUST00000117893 792 ntBASIC19.15■□□□□ 0.66
Gnpda1O88958 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gnpda1O88958 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.15■□□□□ 0.66
Gnpda1O88958 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gnpda1O88958 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Gnpda1O88958 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gnpda1O88958 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.15■□□□□ 0.66
Gnpda1O88958 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms