Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hcn1O88704 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hcn1O88704 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hcn1O88704 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hcn1O88704 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Hcn1O88704 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hcn1O88704 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hcn1O88704 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hcn1O88704 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcn1O88704 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hcn1O88704 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Hcn1O88704 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcn1O88704 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcn1O88704 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.7■□□□□ 0.58
Hcn1O88704 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.7■□□□□ 0.58
Hcn1O88704 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hcn1O88704 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcn1O88704 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hcn1O88704 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hcn1O88704 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.69■□□□□ 0.58
Hcn1O88704 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hcn1O88704 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.69■□□□□ 0.58
Hcn1O88704 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hcn1O88704 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hcn1O88704 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hcn1O88704 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hcn1O88704 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hcn1O88704 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hcn1O88704 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hcn1O88704 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Hcn1O88704 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hcn1O88704 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hcn1O88704 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.68■□□□□ 0.58
Hcn1O88704 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hcn1O88704 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hcn1O88704 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Hcn1O88704 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hcn1O88704 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hcn1O88704 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hcn1O88704 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Hcn1O88704 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hcn1O88704 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hcn1O88704 Gm12821-201ENSMUST00000120022 600 ntBASIC18.67■□□□□ 0.58
Hcn1O88704 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.67■□□□□ 0.58
Hcn1O88704 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hcn1O88704 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hcn1O88704 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hcn1O88704 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Hcn1O88704 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hcn1O88704 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hcn1O88704 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hcn1O88704 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hcn1O88704 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hcn1O88704 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hcn1O88704 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hcn1O88704 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hcn1O88704 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hcn1O88704 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hcn1O88704 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hcn1O88704 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hcn1O88704 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Hcn1O88704 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.66■□□□□ 0.58
Hcn1O88704 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Hcn1O88704 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hcn1O88704 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hcn1O88704 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hcn1O88704 Gm27454-201ENSMUST00000185090 204 ntBASIC18.65■□□□□ 0.58
Hcn1O88704 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.65■□□□□ 0.58
Hcn1O88704 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.65■□□□□ 0.58
Hcn1O88704 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.65■□□□□ 0.58
Hcn1O88704 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hcn1O88704 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hcn1O88704 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Hcn1O88704 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hcn1O88704 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
Hcn1O88704 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hcn1O88704 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.64■□□□□ 0.57
Hcn1O88704 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.64■□□□□ 0.57
Hcn1O88704 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Hcn1O88704 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hcn1O88704 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hcn1O88704 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hcn1O88704 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hcn1O88704 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hcn1O88704 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hcn1O88704 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.63■□□□□ 0.57
Hcn1O88704 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hcn1O88704 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hcn1O88704 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hcn1O88704 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hcn1O88704 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hcn1O88704 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hcn1O88704 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Hcn1O88704 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hcn1O88704 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hcn1O88704 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hcn1O88704 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hcn1O88704 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hcn1O88704 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hcn1O88704 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms