Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ClppO88696 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ClppO88696 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.06■□□□□ 0.64
ClppO88696 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ClppO88696 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ClppO88696 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.06■□□□□ 0.64
ClppO88696 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ClppO88696 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ClppO88696 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.05■□□□□ 0.64
ClppO88696 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ClppO88696 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.05■□□□□ 0.64
ClppO88696 Gm43060-201ENSMUST00000200621 289 ntBASIC19.05■□□□□ 0.64
ClppO88696 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ClppO88696 Gm5874-201ENSMUST00000096101 508 ntBASIC19.05■□□□□ 0.64
ClppO88696 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ClppO88696 Rarb-207ENSMUST00000225921 2756 ntBASIC19.05■□□□□ 0.64
ClppO88696 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.05■□□□□ 0.64
ClppO88696 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ClppO88696 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ClppO88696 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ClppO88696 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
ClppO88696 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.04■□□□□ 0.64
ClppO88696 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ClppO88696 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.04■□□□□ 0.64
ClppO88696 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ClppO88696 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ClppO88696 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ClppO88696 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ClppO88696 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ClppO88696 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ClppO88696 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ClppO88696 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
ClppO88696 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ClppO88696 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
ClppO88696 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ClppO88696 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ClppO88696 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ClppO88696 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.02■□□□□ 0.64
ClppO88696 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ClppO88696 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ClppO88696 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ClppO88696 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ClppO88696 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ClppO88696 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
ClppO88696 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ClppO88696 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ClppO88696 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ClppO88696 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
ClppO88696 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
ClppO88696 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.01■□□□□ 0.63
ClppO88696 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.01■□□□□ 0.63
ClppO88696 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ClppO88696 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ClppO88696 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ClppO88696 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ClppO88696 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ClppO88696 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19■□□□□ 0.63
ClppO88696 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19■□□□□ 0.63
ClppO88696 Smad6-203ENSMUST00000179458 273 ntBASIC19■□□□□ 0.63
ClppO88696 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ClppO88696 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ClppO88696 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ClppO88696 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ClppO88696 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ClppO88696 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ClppO88696 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ClppO88696 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ClppO88696 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.99■□□□□ 0.63
ClppO88696 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ClppO88696 Gm10493-201ENSMUST00000097270 612 ntBASIC18.99■□□□□ 0.63
ClppO88696 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ClppO88696 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ClppO88696 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ClppO88696 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ClppO88696 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ClppO88696 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ClppO88696 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.98■□□□□ 0.63
ClppO88696 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ClppO88696 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ClppO88696 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ClppO88696 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
ClppO88696 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.98■□□□□ 0.63
ClppO88696 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ClppO88696 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.97■□□□□ 0.63
ClppO88696 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.97■□□□□ 0.63
ClppO88696 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ClppO88696 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
ClppO88696 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ClppO88696 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ClppO88696 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ClppO88696 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.97■□□□□ 0.63
ClppO88696 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ClppO88696 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.97■□□□□ 0.63
ClppO88696 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClppO88696 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClppO88696 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClppO88696 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClppO88696 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ClppO88696 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ClppO88696 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms