Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc6a20bO88575 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc6a20bO88575 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.64■■□□□ 1.05
Slc6a20bO88575 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.64■■□□□ 1.05
Slc6a20bO88575 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.64■■□□□ 1.05
Slc6a20bO88575 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc6a20bO88575 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Slc6a20bO88575 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc6a20bO88575 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Slc6a20bO88575 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.63■■□□□ 1.05
Slc6a20bO88575 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.63■■□□□ 1.05
Slc6a20bO88575 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.63■■□□□ 1.05
Slc6a20bO88575 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.63■■□□□ 1.05
Slc6a20bO88575 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc6a20bO88575 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc6a20bO88575 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a20bO88575 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a20bO88575 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a20bO88575 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a20bO88575 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.62■■□□□ 1.05
Slc6a20bO88575 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a20bO88575 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a20bO88575 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a20bO88575 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a20bO88575 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a20bO88575 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc6a20bO88575 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc6a20bO88575 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc6a20bO88575 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Slc6a20bO88575 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Slc6a20bO88575 Gm6211-202ENSMUST00000167849 925 ntBASIC21.61■■□□□ 1.05
Slc6a20bO88575 Gm38205-201ENSMUST00000192243 258 ntBASIC21.61■■□□□ 1.05
Slc6a20bO88575 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.61■■□□□ 1.05
Slc6a20bO88575 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Slc6a20bO88575 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Slc6a20bO88575 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Slc6a20bO88575 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.6■■□□□ 1.05
Slc6a20bO88575 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Slc6a20bO88575 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.6■■□□□ 1.05
Slc6a20bO88575 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Slc6a20bO88575 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc6a20bO88575 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc6a20bO88575 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Slc6a20bO88575 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Slc6a20bO88575 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.59■■□□□ 1.05
Slc6a20bO88575 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Slc6a20bO88575 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Slc6a20bO88575 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Slc6a20bO88575 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Slc6a20bO88575 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Slc6a20bO88575 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.58■■□□□ 1.05
Slc6a20bO88575 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.58■■□□□ 1.05
Slc6a20bO88575 Trmt13-210ENSMUST00000198454 880 ntBASIC21.58■■□□□ 1.05
Slc6a20bO88575 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.58■■□□□ 1.05
Slc6a20bO88575 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Slc6a20bO88575 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.58■■□□□ 1.05
Slc6a20bO88575 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Slc6a20bO88575 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.58■■□□□ 1.04
Slc6a20bO88575 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Slc6a20bO88575 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Slc6a20bO88575 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Slc6a20bO88575 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Slc6a20bO88575 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Slc6a20bO88575 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.57■■□□□ 1.04
Slc6a20bO88575 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc6a20bO88575 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Slc6a20bO88575 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Slc6a20bO88575 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.56■■□□□ 1.04
Slc6a20bO88575 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc6a20bO88575 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc6a20bO88575 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc6a20bO88575 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc6a20bO88575 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc6a20bO88575 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc6a20bO88575 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc6a20bO88575 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc6a20bO88575 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Slc6a20bO88575 Gm13534-201ENSMUST00000121169 513 ntBASIC21.54■■□□□ 1.04
Slc6a20bO88575 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.54■■□□□ 1.04
Slc6a20bO88575 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc6a20bO88575 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Slc6a20bO88575 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.54■■□□□ 1.04
Slc6a20bO88575 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc6a20bO88575 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc6a20bO88575 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Slc6a20bO88575 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Slc6a20bO88575 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc6a20bO88575 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.53■■□□□ 1.04
Slc6a20bO88575 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Slc6a20bO88575 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc6a20bO88575 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc6a20bO88575 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Slc6a20bO88575 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slc6a20bO88575 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Slc6a20bO88575 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slc6a20bO88575 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.52■■□□□ 1.04
Slc6a20bO88575 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slc6a20bO88575 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.52■■□□□ 1.04
Slc6a20bO88575 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slc6a20bO88575 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms