Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ubr1O70481 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
Ubr1O70481 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ubr1O70481 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
Ubr1O70481 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ubr1O70481 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ubr1O70481 Gm43909-201ENSMUST00000203443 1876 ntBASIC25.96■■□□□ 1.75
Ubr1O70481 Gm10653-202ENSMUST00000139570 835 ntBASIC25.96■■□□□ 1.75
Ubr1O70481 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Ubr1O70481 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC25.96■■□□□ 1.75
Ubr1O70481 Gm4968-201ENSMUST00000071458 858 ntBASIC25.96■■□□□ 1.75
Ubr1O70481 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ubr1O70481 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ubr1O70481 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ubr1O70481 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Ubr1O70481 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Ubr1O70481 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Ubr1O70481 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Ubr1O70481 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC25.95■■□□□ 1.74
Ubr1O70481 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Ubr1O70481 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC25.94■■□□□ 1.74
Ubr1O70481 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ubr1O70481 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
Ubr1O70481 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Ubr1O70481 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Ubr1O70481 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ubr1O70481 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ubr1O70481 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Ubr1O70481 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
Ubr1O70481 Gm26524-201ENSMUST00000192339 390 ntBASIC25.93■■□□□ 1.74
Ubr1O70481 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ubr1O70481 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
Ubr1O70481 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Ubr1O70481 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ubr1O70481 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Ubr1O70481 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ubr1O70481 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ubr1O70481 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ubr1O70481 Gm17641-201ENSMUST00000166328 2350 ntBASIC25.92■■□□□ 1.74
Ubr1O70481 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Ubr1O70481 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Ubr1O70481 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ubr1O70481 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ubr1O70481 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC25.91■■□□□ 1.74
Ubr1O70481 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ubr1O70481 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Ubr1O70481 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ubr1O70481 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ubr1O70481 Gm10655-201ENSMUST00000098658 1397 ntBASIC25.91■■□□□ 1.74
Ubr1O70481 Gm13534-201ENSMUST00000121169 513 ntBASIC25.91■■□□□ 1.74
Ubr1O70481 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ubr1O70481 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ubr1O70481 Gm37035-201ENSMUST00000194809 2148 ntBASIC25.9■■□□□ 1.74
Ubr1O70481 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC25.9■■□□□ 1.74
Ubr1O70481 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ubr1O70481 Gm15043-201ENSMUST00000118843 1543 ntBASIC25.9■■□□□ 1.74
Ubr1O70481 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ubr1O70481 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ubr1O70481 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Ubr1O70481 Snhg20-203ENSMUST00000182811 2153 ntBASIC25.9■■□□□ 1.74
Ubr1O70481 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC25.9■■□□□ 1.74
Ubr1O70481 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Ubr1O70481 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Ubr1O70481 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Ubr1O70481 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Ubr1O70481 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Ubr1O70481 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
Ubr1O70481 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
Ubr1O70481 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC25.88■■□□□ 1.73
Ubr1O70481 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC25.88■■□□□ 1.73
Ubr1O70481 Nespas-201ENSMUST00000143738 1083 ntBASIC25.88■■□□□ 1.73
Ubr1O70481 Gm6211-202ENSMUST00000167849 925 ntBASIC25.88■■□□□ 1.73
Ubr1O70481 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ubr1O70481 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ubr1O70481 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ubr1O70481 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC25.88■■□□□ 1.73
Ubr1O70481 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ubr1O70481 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Ubr1O70481 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ubr1O70481 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Ubr1O70481 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ubr1O70481 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ubr1O70481 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC25.87■■□□□ 1.73
Ubr1O70481 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ubr1O70481 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ubr1O70481 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ubr1O70481 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ubr1O70481 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC25.87■■□□□ 1.73
Ubr1O70481 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ubr1O70481 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Ubr1O70481 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Ubr1O70481 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ubr1O70481 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ubr1O70481 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC25.86■■□□□ 1.73
Ubr1O70481 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
Ubr1O70481 Gm6420-201ENSMUST00000193885 723 ntBASIC25.86■■□□□ 1.73
Ubr1O70481 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Ubr1O70481 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC25.86■■□□□ 1.73
Ubr1O70481 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ubr1O70481 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 130.8 ms