Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.58■□□□□ 0.73
Ldb2O55203 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ldb2O55203 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ldb2O55203 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ldb2O55203 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.58■□□□□ 0.72
Ldb2O55203 Spcs1-204ENSMUST00000226782 949 ntBASIC19.58■□□□□ 0.72
Ldb2O55203 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ldb2O55203 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ldb2O55203 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ldb2O55203 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ldb2O55203 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ldb2O55203 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.57■□□□□ 0.72
Ldb2O55203 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.57■□□□□ 0.72
Ldb2O55203 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ldb2O55203 Gm12251-201ENSMUST00000117893 792 ntBASIC19.57■□□□□ 0.72
Ldb2O55203 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ldb2O55203 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ldb2O55203 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ldb2O55203 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ldb2O55203 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ldb2O55203 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ldb2O55203 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ldb2O55203 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ldb2O55203 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ldb2O55203 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ldb2O55203 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ldb2O55203 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ldb2O55203 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ldb2O55203 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Ldb2O55203 AA386476-201ENSMUST00000098781 1665 ntBASIC19.56■□□□□ 0.72
Ldb2O55203 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ldb2O55203 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ldb2O55203 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ldb2O55203 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ldb2O55203 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Ldb2O55203 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ldb2O55203 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ldb2O55203 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ldb2O55203 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.55■□□□□ 0.72
Ldb2O55203 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.55■□□□□ 0.72
Ldb2O55203 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ldb2O55203 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ldb2O55203 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ldb2O55203 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ldb2O55203 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ldb2O55203 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.54■□□□□ 0.72
Ldb2O55203 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ldb2O55203 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ldb2O55203 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ldb2O55203 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ldb2O55203 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ldb2O55203 Gm12821-201ENSMUST00000120022 600 ntBASIC19.54■□□□□ 0.72
Ldb2O55203 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.54■□□□□ 0.72
Ldb2O55203 Gm27454-201ENSMUST00000185090 204 ntBASIC19.54■□□□□ 0.72
Ldb2O55203 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.54■□□□□ 0.72
Ldb2O55203 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ldb2O55203 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ldb2O55203 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ldb2O55203 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ldb2O55203 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ldb2O55203 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ldb2O55203 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ldb2O55203 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ldb2O55203 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ldb2O55203 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.53■□□□□ 0.72
Ldb2O55203 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ldb2O55203 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ldb2O55203 Golph3-202ENSMUST00000226517 2359 ntBASIC19.52■□□□□ 0.72
Ldb2O55203 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ldb2O55203 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Ldb2O55203 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Ldb2O55203 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Ldb2O55203 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ldb2O55203 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.52■□□□□ 0.72
Ldb2O55203 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.52■□□□□ 0.72
Ldb2O55203 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ldb2O55203 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ldb2O55203 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ldb2O55203 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.51■□□□□ 0.71
Ldb2O55203 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ldb2O55203 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ldb2O55203 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ldb2O55203 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ldb2O55203 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ldb2O55203 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ldb2O55203 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Ldb2O55203 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ldb2O55203 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ldb2O55203 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.51■□□□□ 0.71
Ldb2O55203 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ldb2O55203 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ldb2O55203 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ldb2O55203 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ldb2O55203 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ldb2O55203 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ldb2O55203 Mir7075-201ENSMUST00000184187 82 ntBASIC19.5■□□□□ 0.71
Ldb2O55203 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.5■□□□□ 0.71
Ldb2O55203 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ldb2O55203 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ldb2O55203 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms