Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ChkaO54804 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ChkaO54804 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ChkaO54804 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
ChkaO54804 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ChkaO54804 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.85■□□□□ 0.77
ChkaO54804 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ChkaO54804 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.84■□□□□ 0.77
ChkaO54804 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
ChkaO54804 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ChkaO54804 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ChkaO54804 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ChkaO54804 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ChkaO54804 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ChkaO54804 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ChkaO54804 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
ChkaO54804 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ChkaO54804 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ChkaO54804 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ChkaO54804 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ChkaO54804 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ChkaO54804 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ChkaO54804 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ChkaO54804 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ChkaO54804 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.81■□□□□ 0.76
ChkaO54804 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ChkaO54804 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ChkaO54804 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ChkaO54804 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ChkaO54804 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ChkaO54804 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ChkaO54804 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.8■□□□□ 0.76
ChkaO54804 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ChkaO54804 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ChkaO54804 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ChkaO54804 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ChkaO54804 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ChkaO54804 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ChkaO54804 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ChkaO54804 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ChkaO54804 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ChkaO54804 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ChkaO54804 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.79■□□□□ 0.76
ChkaO54804 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.79■□□□□ 0.76
ChkaO54804 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ChkaO54804 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ChkaO54804 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.79■□□□□ 0.76
ChkaO54804 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ChkaO54804 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ChkaO54804 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ChkaO54804 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.78■□□□□ 0.76
ChkaO54804 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
ChkaO54804 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ChkaO54804 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
ChkaO54804 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.77■□□□□ 0.76
ChkaO54804 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.77■□□□□ 0.76
ChkaO54804 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ChkaO54804 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
ChkaO54804 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ChkaO54804 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ChkaO54804 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ChkaO54804 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ChkaO54804 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
ChkaO54804 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.76
ChkaO54804 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ChkaO54804 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ChkaO54804 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
ChkaO54804 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ChkaO54804 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
ChkaO54804 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ChkaO54804 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ChkaO54804 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.76■□□□□ 0.75
ChkaO54804 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.76■□□□□ 0.75
ChkaO54804 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ChkaO54804 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ChkaO54804 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ChkaO54804 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ChkaO54804 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ChkaO54804 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ChkaO54804 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.75■□□□□ 0.75
ChkaO54804 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ChkaO54804 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ChkaO54804 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ChkaO54804 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ChkaO54804 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ChkaO54804 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ChkaO54804 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.75■□□□□ 0.75
ChkaO54804 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
ChkaO54804 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ChkaO54804 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ChkaO54804 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ChkaO54804 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ChkaO54804 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.74■□□□□ 0.75
ChkaO54804 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ChkaO54804 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ChkaO54804 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ChkaO54804 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ChkaO54804 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ChkaO54804 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ChkaO54804 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms