Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.07■□□□□ 0.48
Capn1O35350 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Capn1O35350 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Capn1O35350 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.07■□□□□ 0.48
Capn1O35350 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Capn1O35350 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Capn1O35350 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Capn1O35350 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.06■□□□□ 0.48
Capn1O35350 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Capn1O35350 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Capn1O35350 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Capn1O35350 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Capn1O35350 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Capn1O35350 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Capn1O35350 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Capn1O35350 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Capn1O35350 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Capn1O35350 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Capn1O35350 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Capn1O35350 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Capn1O35350 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Capn1O35350 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Capn1O35350 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.05■□□□□ 0.48
Capn1O35350 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.05■□□□□ 0.48
Capn1O35350 Smad6-203ENSMUST00000179458 273 ntBASIC18.05■□□□□ 0.48
Capn1O35350 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Capn1O35350 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.05■□□□□ 0.48
Capn1O35350 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Capn1O35350 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Capn1O35350 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Capn1O35350 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Capn1O35350 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.04■□□□□ 0.48
Capn1O35350 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Capn1O35350 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Capn1O35350 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Capn1O35350 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Capn1O35350 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Capn1O35350 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Capn1O35350 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
Capn1O35350 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Capn1O35350 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Capn1O35350 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Capn1O35350 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Capn1O35350 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Capn1O35350 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Capn1O35350 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Capn1O35350 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Capn1O35350 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.03■□□□□ 0.48
Capn1O35350 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Capn1O35350 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Capn1O35350 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Capn1O35350 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.03■□□□□ 0.48
Capn1O35350 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Capn1O35350 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Capn1O35350 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Capn1O35350 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
Capn1O35350 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Capn1O35350 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Capn1O35350 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Capn1O35350 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Capn1O35350 Gm40848-201ENSMUST00000221998 324 ntBASIC18.02■□□□□ 0.48
Capn1O35350 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Capn1O35350 Gm10493-201ENSMUST00000097270 612 ntBASIC18.02■□□□□ 0.48
Capn1O35350 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Capn1O35350 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Capn1O35350 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Capn1O35350 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Capn1O35350 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Capn1O35350 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Capn1O35350 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Capn1O35350 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Capn1O35350 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Capn1O35350 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Capn1O35350 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.01■□□□□ 0.47
Capn1O35350 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Capn1O35350 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.01■□□□□ 0.47
Capn1O35350 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Capn1O35350 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Capn1O35350 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.01■□□□□ 0.47
Capn1O35350 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.01■□□□□ 0.47
Capn1O35350 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Capn1O35350 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Capn1O35350 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Capn1O35350 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Capn1O35350 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.01■□□□□ 0.47
Capn1O35350 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Capn1O35350 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Capn1O35350 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Capn1O35350 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Capn1O35350 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Capn1O35350 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Capn1O35350 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Capn1O35350 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Capn1O35350 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Capn1O35350 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18■□□□□ 0.47
Capn1O35350 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18■□□□□ 0.47
Capn1O35350 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
Capn1O35350 Gm5297-201ENSMUST00000198555 1171 ntBASIC18■□□□□ 0.47
Capn1O35350 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18■□□□□ 0.47
Capn1O35350 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms