Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC25.53■■□□□ 1.68
Col15a1O35206 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Col15a1O35206 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Col15a1O35206 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
Col15a1O35206 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Col15a1O35206 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC25.52■■□□□ 1.68
Col15a1O35206 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
Col15a1O35206 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Col15a1O35206 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Col15a1O35206 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Col15a1O35206 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Col15a1O35206 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Col15a1O35206 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC25.51■■□□□ 1.67
Col15a1O35206 Gm6420-201ENSMUST00000193885 723 ntBASIC25.51■■□□□ 1.67
Col15a1O35206 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Col15a1O35206 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Col15a1O35206 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Col15a1O35206 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Col15a1O35206 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Col15a1O35206 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Col15a1O35206 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Col15a1O35206 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Col15a1O35206 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC25.5■■□□□ 1.67
Col15a1O35206 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Col15a1O35206 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
Col15a1O35206 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Col15a1O35206 Gm10655-201ENSMUST00000098658 1397 ntBASIC25.49■■□□□ 1.67
Col15a1O35206 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Col15a1O35206 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
Col15a1O35206 Gm3807-201ENSMUST00000193520 1168 ntBASIC25.49■■□□□ 1.67
Col15a1O35206 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC25.49■■□□□ 1.67
Col15a1O35206 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
Col15a1O35206 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
Col15a1O35206 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Col15a1O35206 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Col15a1O35206 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Col15a1O35206 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Col15a1O35206 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Col15a1O35206 Gm7290-201ENSMUST00000104990 617 ntBASIC25.48■■□□□ 1.67
Col15a1O35206 Gm12918-201ENSMUST00000120234 636 ntBASIC25.48■■□□□ 1.67
Col15a1O35206 Gm15710-201ENSMUST00000121821 636 ntBASIC25.48■■□□□ 1.67
Col15a1O35206 Gm5075-201ENSMUST00000196916 622 ntBASIC25.48■■□□□ 1.67
Col15a1O35206 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
Col15a1O35206 Gm6365-201ENSMUST00000054711 744 ntBASIC25.48■■□□□ 1.67
Col15a1O35206 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC25.48■■□□□ 1.67
Col15a1O35206 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC25.48■■□□□ 1.67
Col15a1O35206 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Col15a1O35206 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col15a1O35206 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Col15a1O35206 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Col15a1O35206 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col15a1O35206 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col15a1O35206 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
Col15a1O35206 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Col15a1O35206 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC25.46■■□□□ 1.67
Col15a1O35206 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Col15a1O35206 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Col15a1O35206 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
Col15a1O35206 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
Col15a1O35206 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.67
Col15a1O35206 AC154266.1-201ENSMUST00000223190 503 ntBASIC25.45■■□□□ 1.67
Col15a1O35206 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC25.45■■□□□ 1.67
Col15a1O35206 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Col15a1O35206 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Col15a1O35206 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Col15a1O35206 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC25.45■■□□□ 1.66
Col15a1O35206 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
Col15a1O35206 Gm20760-201ENSMUST00000179197 648 ntBASIC25.44■■□□□ 1.66
Col15a1O35206 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC25.44■■□□□ 1.66
Col15a1O35206 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC25.44■■□□□ 1.66
Col15a1O35206 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Col15a1O35206 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Col15a1O35206 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
Col15a1O35206 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
Col15a1O35206 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC25.44■■□□□ 1.66
Col15a1O35206 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC25.44■■□□□ 1.66
Col15a1O35206 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col15a1O35206 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col15a1O35206 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col15a1O35206 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col15a1O35206 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC25.43■■□□□ 1.66
Col15a1O35206 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col15a1O35206 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col15a1O35206 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Col15a1O35206 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Col15a1O35206 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Col15a1O35206 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Col15a1O35206 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Col15a1O35206 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Col15a1O35206 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
Col15a1O35206 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC25.42■■□□□ 1.66
Col15a1O35206 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
Col15a1O35206 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col15a1O35206 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Col15a1O35206 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col15a1O35206 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Col15a1O35206 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col15a1O35206 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col15a1O35206 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Col15a1O35206 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms