Protein–RNA interactions for Protein: O08576

Rundc3a, RUN domain-containing protein 3A, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3aO08576 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.1■□□□□ 0.65
Rundc3aO08576 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rundc3aO08576 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rundc3aO08576 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rundc3aO08576 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rundc3aO08576 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.1■□□□□ 0.65
Rundc3aO08576 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rundc3aO08576 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rundc3aO08576 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Rundc3aO08576 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Rundc3aO08576 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rundc3aO08576 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rundc3aO08576 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rundc3aO08576 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rundc3aO08576 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rundc3aO08576 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Rundc3aO08576 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rundc3aO08576 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Rundc3aO08576 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rundc3aO08576 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
Rundc3aO08576 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rundc3aO08576 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rundc3aO08576 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rundc3aO08576 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rundc3aO08576 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rundc3aO08576 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rundc3aO08576 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Rundc3aO08576 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rundc3aO08576 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Rundc3aO08576 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rundc3aO08576 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Rundc3aO08576 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rundc3aO08576 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rundc3aO08576 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rundc3aO08576 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Rundc3aO08576 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.08■□□□□ 0.64
Rundc3aO08576 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
Rundc3aO08576 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rundc3aO08576 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rundc3aO08576 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rundc3aO08576 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rundc3aO08576 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rundc3aO08576 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rundc3aO08576 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Rundc3aO08576 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rundc3aO08576 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
Rundc3aO08576 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Rundc3aO08576 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.07■□□□□ 0.64
Rundc3aO08576 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rundc3aO08576 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Rundc3aO08576 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rundc3aO08576 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rundc3aO08576 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rundc3aO08576 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.06■□□□□ 0.64
Rundc3aO08576 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.06■□□□□ 0.64
Rundc3aO08576 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rundc3aO08576 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.06■□□□□ 0.64
Rundc3aO08576 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.06■□□□□ 0.64
Rundc3aO08576 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rundc3aO08576 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.05■□□□□ 0.64
Rundc3aO08576 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.05■□□□□ 0.64
Rundc3aO08576 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rundc3aO08576 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rundc3aO08576 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rundc3aO08576 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Rundc3aO08576 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rundc3aO08576 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rundc3aO08576 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.05■□□□□ 0.64
Rundc3aO08576 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Rundc3aO08576 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rundc3aO08576 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.04■□□□□ 0.64
Rundc3aO08576 Gm22238-201ENSMUST00000175222 88 ntBASIC19.04■□□□□ 0.64
Rundc3aO08576 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.04■□□□□ 0.64
Rundc3aO08576 Gm9959-201ENSMUST00000068277 390 ntBASIC19.04■□□□□ 0.64
Rundc3aO08576 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rundc3aO08576 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rundc3aO08576 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rundc3aO08576 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rundc3aO08576 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rundc3aO08576 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rundc3aO08576 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rundc3aO08576 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rundc3aO08576 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rundc3aO08576 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rundc3aO08576 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rundc3aO08576 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rundc3aO08576 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rundc3aO08576 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rundc3aO08576 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Rundc3aO08576 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rundc3aO08576 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rundc3aO08576 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rundc3aO08576 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.03■□□□□ 0.64
Rundc3aO08576 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rundc3aO08576 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rundc3aO08576 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.02■□□□□ 0.64
Rundc3aO08576 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rundc3aO08576 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Rundc3aO08576 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.02■□□□□ 0.64
Rundc3aO08576 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms