Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Usp35M0QWN7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp35M0QWN7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Usp35M0QWN7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp35M0QWN7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp35M0QWN7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp35M0QWN7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp35M0QWN7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp35M0QWN7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp35M0QWN7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp35M0QWN7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp35M0QWN7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp35M0QWN7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp35M0QWN7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp35M0QWN7 Gm43060-201ENSMUST00000200621 289 ntBASIC20.98■□□□□ 0.95
Usp35M0QWN7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Usp35M0QWN7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Usp35M0QWN7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp35M0QWN7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp35M0QWN7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Usp35M0QWN7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp35M0QWN7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp35M0QWN7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.97■□□□□ 0.95
Usp35M0QWN7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Usp35M0QWN7 Iqck-206ENSMUST00000208658 2891 ntBASIC20.97■□□□□ 0.95
Usp35M0QWN7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Usp35M0QWN7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Usp35M0QWN7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp35M0QWN7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Usp35M0QWN7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp35M0QWN7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.96■□□□□ 0.95
Usp35M0QWN7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Usp35M0QWN7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp35M0QWN7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp35M0QWN7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Usp35M0QWN7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp35M0QWN7 Golph3-202ENSMUST00000226517 2359 ntBASIC20.95■□□□□ 0.94
Usp35M0QWN7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.95■□□□□ 0.94
Usp35M0QWN7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.95■□□□□ 0.94
Usp35M0QWN7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp35M0QWN7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp35M0QWN7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.95■□□□□ 0.94
Usp35M0QWN7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp35M0QWN7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Usp35M0QWN7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp35M0QWN7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Usp35M0QWN7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp35M0QWN7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp35M0QWN7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp35M0QWN7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp35M0QWN7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.94■□□□□ 0.94
Usp35M0QWN7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp35M0QWN7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp35M0QWN7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp35M0QWN7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Usp35M0QWN7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp35M0QWN7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp35M0QWN7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp35M0QWN7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp35M0QWN7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.93■□□□□ 0.94
Usp35M0QWN7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp35M0QWN7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp35M0QWN7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp35M0QWN7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp35M0QWN7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp35M0QWN7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp35M0QWN7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp35M0QWN7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp35M0QWN7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp35M0QWN7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Usp35M0QWN7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp35M0QWN7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp35M0QWN7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp35M0QWN7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Usp35M0QWN7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp35M0QWN7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
Usp35M0QWN7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp35M0QWN7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Usp35M0QWN7 Smad6-203ENSMUST00000179458 273 ntBASIC20.91■□□□□ 0.94
Usp35M0QWN7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.91■□□□□ 0.94
Usp35M0QWN7 Gm40848-201ENSMUST00000221998 324 ntBASIC20.91■□□□□ 0.94
Usp35M0QWN7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp35M0QWN7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp35M0QWN7 Gm10493-201ENSMUST00000097270 612 ntBASIC20.91■□□□□ 0.94
Usp35M0QWN7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp35M0QWN7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Usp35M0QWN7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp35M0QWN7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.9■□□□□ 0.94
Usp35M0QWN7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp35M0QWN7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp35M0QWN7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.9■□□□□ 0.94
Usp35M0QWN7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp35M0QWN7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp35M0QWN7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp35M0QWN7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Usp35M0QWN7 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.9■□□□□ 0.94
Usp35M0QWN7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp35M0QWN7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.9■□□□□ 0.94
Usp35M0QWN7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.9■□□□□ 0.94
Usp35M0QWN7 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms