Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.14■□□□□ 0.81
Pcdh9F8VPK8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdh9F8VPK8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Pcdh9F8VPK8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Pcdh9F8VPK8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdh9F8VPK8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Pcdh9F8VPK8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdh9F8VPK8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh9F8VPK8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh9F8VPK8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh9F8VPK8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh9F8VPK8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Pcdh9F8VPK8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Pcdh9F8VPK8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh9F8VPK8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh9F8VPK8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh9F8VPK8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdh9F8VPK8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh9F8VPK8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh9F8VPK8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.12■□□□□ 0.81
Pcdh9F8VPK8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh9F8VPK8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.12■□□□□ 0.81
Pcdh9F8VPK8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh9F8VPK8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh9F8VPK8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Pcdh9F8VPK8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh9F8VPK8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.12■□□□□ 0.81
Pcdh9F8VPK8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh9F8VPK8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdh9F8VPK8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Pcdh9F8VPK8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh9F8VPK8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh9F8VPK8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Pcdh9F8VPK8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh9F8VPK8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh9F8VPK8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh9F8VPK8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh9F8VPK8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.11■□□□□ 0.81
Pcdh9F8VPK8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh9F8VPK8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh9F8VPK8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh9F8VPK8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh9F8VPK8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdh9F8VPK8 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.1■□□□□ 0.81
Pcdh9F8VPK8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh9F8VPK8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Pcdh9F8VPK8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.1■□□□□ 0.81
Pcdh9F8VPK8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh9F8VPK8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh9F8VPK8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Pcdh9F8VPK8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh9F8VPK8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Pcdh9F8VPK8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdh9F8VPK8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh9F8VPK8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh9F8VPK8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh9F8VPK8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh9F8VPK8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh9F8VPK8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh9F8VPK8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdh9F8VPK8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Pcdh9F8VPK8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdh9F8VPK8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdh9F8VPK8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Pcdh9F8VPK8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.08■□□□□ 0.8
Pcdh9F8VPK8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdh9F8VPK8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdh9F8VPK8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh9F8VPK8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh9F8VPK8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.07■□□□□ 0.8
Pcdh9F8VPK8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Pcdh9F8VPK8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Pcdh9F8VPK8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh9F8VPK8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh9F8VPK8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh9F8VPK8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.07■□□□□ 0.8
Pcdh9F8VPK8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh9F8VPK8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh9F8VPK8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh9F8VPK8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.07■□□□□ 0.8
Pcdh9F8VPK8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.07■□□□□ 0.8
Pcdh9F8VPK8 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.06■□□□□ 0.8
Pcdh9F8VPK8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh9F8VPK8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.06■□□□□ 0.8
Pcdh9F8VPK8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Pcdh9F8VPK8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh9F8VPK8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh9F8VPK8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh9F8VPK8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdh9F8VPK8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh9F8VPK8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdh9F8VPK8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
Pcdh9F8VPK8 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.05■□□□□ 0.8
Pcdh9F8VPK8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.05■□□□□ 0.8
Pcdh9F8VPK8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh9F8VPK8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh9F8VPK8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh9F8VPK8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
Pcdh9F8VPK8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh9F8VPK8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms