Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdh1F7BJK1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pcdh1F7BJK1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.65■□□□□ 0.42
Pcdh1F7BJK1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh1F7BJK1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh1F7BJK1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh1F7BJK1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh1F7BJK1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh1F7BJK1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh1F7BJK1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdh1F7BJK1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh1F7BJK1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh1F7BJK1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh1F7BJK1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Pcdh1F7BJK1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh1F7BJK1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh1F7BJK1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pcdh1F7BJK1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh1F7BJK1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh1F7BJK1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh1F7BJK1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh1F7BJK1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh1F7BJK1 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.64■□□□□ 0.41
Pcdh1F7BJK1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Pcdh1F7BJK1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh1F7BJK1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh1F7BJK1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh1F7BJK1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh1F7BJK1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdh1F7BJK1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pcdh1F7BJK1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh1F7BJK1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh1F7BJK1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pcdh1F7BJK1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdh1F7BJK1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pcdh1F7BJK1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh1F7BJK1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh1F7BJK1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh1F7BJK1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh1F7BJK1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh1F7BJK1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh1F7BJK1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh1F7BJK1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pcdh1F7BJK1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pcdh1F7BJK1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh1F7BJK1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh1F7BJK1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh1F7BJK1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdh1F7BJK1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh1F7BJK1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pcdh1F7BJK1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pcdh1F7BJK1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdh1F7BJK1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pcdh1F7BJK1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh1F7BJK1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh1F7BJK1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh1F7BJK1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pcdh1F7BJK1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh1F7BJK1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh1F7BJK1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh1F7BJK1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh1F7BJK1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pcdh1F7BJK1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.61■□□□□ 0.41
Pcdh1F7BJK1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pcdh1F7BJK1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdh1F7BJK1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh1F7BJK1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh1F7BJK1 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.6■□□□□ 0.41
Pcdh1F7BJK1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh1F7BJK1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh1F7BJK1 Gm43530-201ENSMUST00000195920 274 ntBASIC17.6■□□□□ 0.41
Pcdh1F7BJK1 Gm40881-201ENSMUST00000223397 166 ntBASIC17.6■□□□□ 0.41
Pcdh1F7BJK1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh1F7BJK1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh1F7BJK1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh1F7BJK1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdh1F7BJK1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh1F7BJK1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh1F7BJK1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh1F7BJK1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pcdh1F7BJK1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdh1F7BJK1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdh1F7BJK1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh1F7BJK1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh1F7BJK1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh1F7BJK1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdh1F7BJK1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh1F7BJK1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdh1F7BJK1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
Pcdh1F7BJK1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh1F7BJK1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pcdh1F7BJK1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh1F7BJK1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh1F7BJK1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdh1F7BJK1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh1F7BJK1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Pcdh1F7BJK1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdh1F7BJK1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh1F7BJK1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdh1F7BJK1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 137.2 ms