Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TprF6ZDS4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TprF6ZDS4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TprF6ZDS4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TprF6ZDS4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TprF6ZDS4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TprF6ZDS4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TprF6ZDS4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TprF6ZDS4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TprF6ZDS4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.05■□□□□ 0.48
TprF6ZDS4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TprF6ZDS4 Gm37856-201ENSMUST00000191634 999 ntBASIC18.05■□□□□ 0.48
TprF6ZDS4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TprF6ZDS4 Gm7514-201ENSMUST00000209475 934 ntBASIC18.05■□□□□ 0.48
TprF6ZDS4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TprF6ZDS4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TprF6ZDS4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TprF6ZDS4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TprF6ZDS4 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.05■□□□□ 0.48
TprF6ZDS4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TprF6ZDS4 Gm715-201ENSMUST00000117865 831 ntBASIC18.04■□□□□ 0.48
TprF6ZDS4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.04■□□□□ 0.48
TprF6ZDS4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TprF6ZDS4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TprF6ZDS4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TprF6ZDS4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TprF6ZDS4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TprF6ZDS4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TprF6ZDS4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TprF6ZDS4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TprF6ZDS4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TprF6ZDS4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TprF6ZDS4 Mir5133-201ENSMUST00000174955 77 ntBASIC18.04■□□□□ 0.48
TprF6ZDS4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.04■□□□□ 0.48
TprF6ZDS4 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TprF6ZDS4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TprF6ZDS4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TprF6ZDS4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TprF6ZDS4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.03■□□□□ 0.48
TprF6ZDS4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TprF6ZDS4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TprF6ZDS4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TprF6ZDS4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TprF6ZDS4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TprF6ZDS4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TprF6ZDS4 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.03■□□□□ 0.48
TprF6ZDS4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.03■□□□□ 0.48
TprF6ZDS4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TprF6ZDS4 Gm20049-201ENSMUST00000219950 730 ntBASIC18.03■□□□□ 0.48
TprF6ZDS4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TprF6ZDS4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TprF6ZDS4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TprF6ZDS4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TprF6ZDS4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.02■□□□□ 0.48
TprF6ZDS4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.02■□□□□ 0.48
TprF6ZDS4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TprF6ZDS4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TprF6ZDS4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TprF6ZDS4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TprF6ZDS4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TprF6ZDS4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.02■□□□□ 0.48
TprF6ZDS4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
TprF6ZDS4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TprF6ZDS4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
TprF6ZDS4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
TprF6ZDS4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
TprF6ZDS4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TprF6ZDS4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TprF6ZDS4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TprF6ZDS4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TprF6ZDS4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TprF6ZDS4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TprF6ZDS4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TprF6ZDS4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TprF6ZDS4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TprF6ZDS4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.01■□□□□ 0.47
TprF6ZDS4 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.01■□□□□ 0.47
TprF6ZDS4 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.01■□□□□ 0.47
TprF6ZDS4 Gm9988-201ENSMUST00000069786 435 ntBASIC18.01■□□□□ 0.47
TprF6ZDS4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TprF6ZDS4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TprF6ZDS4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TprF6ZDS4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18■□□□□ 0.47
TprF6ZDS4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TprF6ZDS4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18■□□□□ 0.47
TprF6ZDS4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TprF6ZDS4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18■□□□□ 0.47
TprF6ZDS4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TprF6ZDS4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TprF6ZDS4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18■□□□□ 0.47
TprF6ZDS4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TprF6ZDS4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TprF6ZDS4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TprF6ZDS4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TprF6ZDS4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TprF6ZDS4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TprF6ZDS4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.99■□□□□ 0.47
TprF6ZDS4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TprF6ZDS4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TprF6ZDS4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms