Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
R3hdm1E9Q9Q2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
R3hdm1E9Q9Q2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
R3hdm1E9Q9Q2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
R3hdm1E9Q9Q2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
R3hdm1E9Q9Q2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
R3hdm1E9Q9Q2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.64■■□□□ 1.05
R3hdm1E9Q9Q2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.64■■□□□ 1.05
R3hdm1E9Q9Q2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
R3hdm1E9Q9Q2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
R3hdm1E9Q9Q2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
R3hdm1E9Q9Q2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm1E9Q9Q2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
R3hdm1E9Q9Q2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm1E9Q9Q2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm1E9Q9Q2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm1E9Q9Q2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm1E9Q9Q2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm1E9Q9Q2 Gm10252-201ENSMUST00000209541 832 ntBASIC21.63■■□□□ 1.05
R3hdm1E9Q9Q2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm1E9Q9Q2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
R3hdm1E9Q9Q2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm1E9Q9Q2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm1E9Q9Q2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm1E9Q9Q2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm1E9Q9Q2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm1E9Q9Q2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm1E9Q9Q2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm1E9Q9Q2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3hdm1E9Q9Q2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3hdm1E9Q9Q2 Gm13234-201ENSMUST00000120010 747 ntBASIC21.62■■□□□ 1.05
R3hdm1E9Q9Q2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.62■■□□□ 1.05
R3hdm1E9Q9Q2 Gm22240-201ENSMUST00000175225 82 ntBASIC21.62■■□□□ 1.05
R3hdm1E9Q9Q2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
R3hdm1E9Q9Q2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.62■■□□□ 1.05
R3hdm1E9Q9Q2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.62■■□□□ 1.05
R3hdm1E9Q9Q2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3hdm1E9Q9Q2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
R3hdm1E9Q9Q2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
R3hdm1E9Q9Q2 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.61■■□□□ 1.05
R3hdm1E9Q9Q2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.61■■□□□ 1.05
R3hdm1E9Q9Q2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
R3hdm1E9Q9Q2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
R3hdm1E9Q9Q2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
R3hdm1E9Q9Q2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
R3hdm1E9Q9Q2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
R3hdm1E9Q9Q2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
R3hdm1E9Q9Q2 Gm22325-201ENSMUST00000158904 308 ntBASIC21.6■■□□□ 1.05
R3hdm1E9Q9Q2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
R3hdm1E9Q9Q2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
R3hdm1E9Q9Q2 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.6■■□□□ 1.05
R3hdm1E9Q9Q2 Reep4-203ENSMUST00000226563 1444 ntBASIC21.6■■□□□ 1.05
R3hdm1E9Q9Q2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
R3hdm1E9Q9Q2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
R3hdm1E9Q9Q2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.6■■□□□ 1.05
R3hdm1E9Q9Q2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
R3hdm1E9Q9Q2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3hdm1E9Q9Q2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.59■■□□□ 1.05
R3hdm1E9Q9Q2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3hdm1E9Q9Q2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3hdm1E9Q9Q2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
R3hdm1E9Q9Q2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
R3hdm1E9Q9Q2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3hdm1E9Q9Q2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.59■■□□□ 1.05
R3hdm1E9Q9Q2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3hdm1E9Q9Q2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
R3hdm1E9Q9Q2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3hdm1E9Q9Q2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
R3hdm1E9Q9Q2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
R3hdm1E9Q9Q2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
R3hdm1E9Q9Q2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.58■■□□□ 1.05
R3hdm1E9Q9Q2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
R3hdm1E9Q9Q2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.58■■□□□ 1.05
R3hdm1E9Q9Q2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
R3hdm1E9Q9Q2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
R3hdm1E9Q9Q2 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.58■■□□□ 1.05
R3hdm1E9Q9Q2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
R3hdm1E9Q9Q2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
R3hdm1E9Q9Q2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
R3hdm1E9Q9Q2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3hdm1E9Q9Q2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.57■■□□□ 1.04
R3hdm1E9Q9Q2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3hdm1E9Q9Q2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3hdm1E9Q9Q2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
R3hdm1E9Q9Q2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
R3hdm1E9Q9Q2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
R3hdm1E9Q9Q2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3hdm1E9Q9Q2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3hdm1E9Q9Q2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3hdm1E9Q9Q2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
R3hdm1E9Q9Q2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3hdm1E9Q9Q2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3hdm1E9Q9Q2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.56■■□□□ 1.04
R3hdm1E9Q9Q2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3hdm1E9Q9Q2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
R3hdm1E9Q9Q2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3hdm1E9Q9Q2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3hdm1E9Q9Q2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3hdm1E9Q9Q2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
R3hdm1E9Q9Q2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms