Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ube4aE9Q735 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ube4aE9Q735 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ube4aE9Q735 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ube4aE9Q735 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ube4aE9Q735 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ube4aE9Q735 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ube4aE9Q735 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC23.8■■□□□ 1.4
Ube4aE9Q735 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ube4aE9Q735 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ube4aE9Q735 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ube4aE9Q735 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ube4aE9Q735 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.79■■□□□ 1.4
Ube4aE9Q735 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ube4aE9Q735 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ube4aE9Q735 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ube4aE9Q735 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ube4aE9Q735 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ube4aE9Q735 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ube4aE9Q735 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ube4aE9Q735 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC23.79■■□□□ 1.4
Ube4aE9Q735 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ube4aE9Q735 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ube4aE9Q735 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Ube4aE9Q735 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ube4aE9Q735 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ube4aE9Q735 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC23.78■■□□□ 1.4
Ube4aE9Q735 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ube4aE9Q735 Gm13146-201ENSMUST00000118508 780 ntBASIC23.78■■□□□ 1.4
Ube4aE9Q735 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC23.78■■□□□ 1.4
Ube4aE9Q735 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Ube4aE9Q735 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC23.78■■□□□ 1.4
Ube4aE9Q735 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC23.78■■□□□ 1.4
Ube4aE9Q735 Gm13042-201ENSMUST00000119244 1955 ntBASIC23.78■■□□□ 1.4
Ube4aE9Q735 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ube4aE9Q735 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ube4aE9Q735 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
Ube4aE9Q735 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ube4aE9Q735 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Ube4aE9Q735 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC23.77■■□□□ 1.4
Ube4aE9Q735 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ube4aE9Q735 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ube4aE9Q735 Snhg20-203ENSMUST00000182811 2153 ntBASIC23.76■■□□□ 1.39
Ube4aE9Q735 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ube4aE9Q735 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ube4aE9Q735 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ube4aE9Q735 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ube4aE9Q735 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ube4aE9Q735 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ube4aE9Q735 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ube4aE9Q735 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ube4aE9Q735 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ube4aE9Q735 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Ube4aE9Q735 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC23.75■■□□□ 1.39
Ube4aE9Q735 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Ube4aE9Q735 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC23.75■■□□□ 1.39
Ube4aE9Q735 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ube4aE9Q735 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
Ube4aE9Q735 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Ube4aE9Q735 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ube4aE9Q735 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ube4aE9Q735 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ube4aE9Q735 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC23.74■■□□□ 1.39
Ube4aE9Q735 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ube4aE9Q735 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ube4aE9Q735 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ube4aE9Q735 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ube4aE9Q735 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Ube4aE9Q735 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ube4aE9Q735 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ube4aE9Q735 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ube4aE9Q735 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ube4aE9Q735 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Ube4aE9Q735 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ube4aE9Q735 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ube4aE9Q735 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ube4aE9Q735 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ube4aE9Q735 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ube4aE9Q735 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Ube4aE9Q735 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC23.73■■□□□ 1.39
Ube4aE9Q735 AC152827.1-201ENSMUST00000221143 2189 ntBASIC23.73■■□□□ 1.39
Ube4aE9Q735 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Ube4aE9Q735 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Ube4aE9Q735 Gm43909-201ENSMUST00000203443 1876 ntBASIC23.73■■□□□ 1.39
Ube4aE9Q735 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Ube4aE9Q735 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC23.72■■□□□ 1.39
Ube4aE9Q735 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC23.72■■□□□ 1.39
Ube4aE9Q735 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ube4aE9Q735 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ube4aE9Q735 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC23.72■■□□□ 1.39
Ube4aE9Q735 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ube4aE9Q735 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ube4aE9Q735 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ube4aE9Q735 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Ube4aE9Q735 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC23.71■■□□□ 1.39
Ube4aE9Q735 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ube4aE9Q735 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ube4aE9Q735 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ube4aE9Q735 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ube4aE9Q735 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms