Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pcdh17E9PXF0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh17E9PXF0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdh17E9PXF0 Iqck-206ENSMUST00000208658 2891 ntBASIC18.24■□□□□ 0.51
Pcdh17E9PXF0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh17E9PXF0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh17E9PXF0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh17E9PXF0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh17E9PXF0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh17E9PXF0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
Pcdh17E9PXF0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh17E9PXF0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh17E9PXF0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh17E9PXF0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh17E9PXF0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh17E9PXF0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh17E9PXF0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh17E9PXF0 Gm27405-201ENSMUST00000184201 112 ntBASIC18.22■□□□□ 0.51
Pcdh17E9PXF0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh17E9PXF0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh17E9PXF0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh17E9PXF0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh17E9PXF0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh17E9PXF0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh17E9PXF0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdh17E9PXF0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh17E9PXF0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdh17E9PXF0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh17E9PXF0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh17E9PXF0 Gm29257-201ENSMUST00000186115 639 ntBASIC18.21■□□□□ 0.51
Pcdh17E9PXF0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.21■□□□□ 0.51
Pcdh17E9PXF0 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.21■□□□□ 0.51
Pcdh17E9PXF0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.21■□□□□ 0.51
Pcdh17E9PXF0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh17E9PXF0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh17E9PXF0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdh17E9PXF0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.2■□□□□ 0.5
Pcdh17E9PXF0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh17E9PXF0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcdh17E9PXF0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh17E9PXF0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Pcdh17E9PXF0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pcdh17E9PXF0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh17E9PXF0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh17E9PXF0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdh17E9PXF0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh17E9PXF0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh17E9PXF0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh17E9PXF0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh17E9PXF0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh17E9PXF0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh17E9PXF0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.19■□□□□ 0.5
Pcdh17E9PXF0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh17E9PXF0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh17E9PXF0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdh17E9PXF0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh17E9PXF0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh17E9PXF0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh17E9PXF0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh17E9PXF0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh17E9PXF0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh17E9PXF0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Pcdh17E9PXF0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh17E9PXF0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh17E9PXF0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh17E9PXF0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh17E9PXF0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh17E9PXF0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Pcdh17E9PXF0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Pcdh17E9PXF0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh17E9PXF0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdh17E9PXF0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh17E9PXF0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh17E9PXF0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh17E9PXF0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh17E9PXF0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.17■□□□□ 0.5
Pcdh17E9PXF0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pcdh17E9PXF0 Gm10033-202ENSMUST00000211874 928 ntBASIC18.17■□□□□ 0.5
Pcdh17E9PXF0 Gm18671-201ENSMUST00000214826 683 ntBASIC18.17■□□□□ 0.5
Pcdh17E9PXF0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.17■□□□□ 0.5
Pcdh17E9PXF0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh17E9PXF0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdh17E9PXF0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh17E9PXF0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh17E9PXF0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh17E9PXF0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pcdh17E9PXF0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh17E9PXF0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh17E9PXF0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh17E9PXF0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.16■□□□□ 0.5
Pcdh17E9PXF0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh17E9PXF0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.16■□□□□ 0.5
Pcdh17E9PXF0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh17E9PXF0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh17E9PXF0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh17E9PXF0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh17E9PXF0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh17E9PXF0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.15■□□□□ 0.5
Pcdh17E9PXF0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdh17E9PXF0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms