Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Dchs1E9PVD3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Dchs1E9PVD3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Dchs1E9PVD3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Dchs1E9PVD3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Dchs1E9PVD3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Dchs1E9PVD3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Dchs1E9PVD3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Dchs1E9PVD3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.61■□□□□ 0.41
Dchs1E9PVD3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Dchs1E9PVD3 Gm9988-201ENSMUST00000069786 435 ntBASIC17.61■□□□□ 0.41
Dchs1E9PVD3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Dchs1E9PVD3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Dchs1E9PVD3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Dchs1E9PVD3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Dchs1E9PVD3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.6■□□□□ 0.41
Dchs1E9PVD3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.6■□□□□ 0.41
Dchs1E9PVD3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Dchs1E9PVD3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Dchs1E9PVD3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Dchs1E9PVD3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Dchs1E9PVD3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Dchs1E9PVD3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Dchs1E9PVD3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Dchs1E9PVD3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.59■□□□□ 0.41
Dchs1E9PVD3 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.59■□□□□ 0.41
Dchs1E9PVD3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Dchs1E9PVD3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Dchs1E9PVD3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Dchs1E9PVD3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Dchs1E9PVD3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Dchs1E9PVD3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.59■□□□□ 0.41
Dchs1E9PVD3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Dchs1E9PVD3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Dchs1E9PVD3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Dchs1E9PVD3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Dchs1E9PVD3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Dchs1E9PVD3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.58■□□□□ 0.4
Dchs1E9PVD3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Dchs1E9PVD3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Dchs1E9PVD3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Dchs1E9PVD3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Dchs1E9PVD3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Dchs1E9PVD3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Dchs1E9PVD3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Dchs1E9PVD3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.57■□□□□ 0.4
Dchs1E9PVD3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Dchs1E9PVD3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.57■□□□□ 0.4
Dchs1E9PVD3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Dchs1E9PVD3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Dchs1E9PVD3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Dchs1E9PVD3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.57■□□□□ 0.4
Dchs1E9PVD3 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.57■□□□□ 0.4
Dchs1E9PVD3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Dchs1E9PVD3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Dchs1E9PVD3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Dchs1E9PVD3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Dchs1E9PVD3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
Dchs1E9PVD3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Dchs1E9PVD3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Dchs1E9PVD3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Dchs1E9PVD3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Dchs1E9PVD3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.56■□□□□ 0.4
Dchs1E9PVD3 Gm10812-201ENSMUST00000099864 546 ntBASIC17.56■□□□□ 0.4
Dchs1E9PVD3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Dchs1E9PVD3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Dchs1E9PVD3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Dchs1E9PVD3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Dchs1E9PVD3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Dchs1E9PVD3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Dchs1E9PVD3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.56■□□□□ 0.4
Dchs1E9PVD3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dchs1E9PVD3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dchs1E9PVD3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dchs1E9PVD3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Dchs1E9PVD3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dchs1E9PVD3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dchs1E9PVD3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dchs1E9PVD3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.55■□□□□ 0.4
Dchs1E9PVD3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dchs1E9PVD3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dchs1E9PVD3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dchs1E9PVD3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.54■□□□□ 0.4
Dchs1E9PVD3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dchs1E9PVD3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
Dchs1E9PVD3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dchs1E9PVD3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.54■□□□□ 0.4
Dchs1E9PVD3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Dchs1E9PVD3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Dchs1E9PVD3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dchs1E9PVD3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Dchs1E9PVD3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dchs1E9PVD3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dchs1E9PVD3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Dchs1E9PVD3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dchs1E9PVD3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dchs1E9PVD3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dchs1E9PVD3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dchs1E9PVD3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.53■□□□□ 0.4
Dchs1E9PVD3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms