Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Mmp27D3YV89 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.52■□□□□ 0.24
Mmp27D3YV89 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Mmp27D3YV89 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Mmp27D3YV89 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.52■□□□□ 0.23
Mmp27D3YV89 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Mmp27D3YV89 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Mmp27D3YV89 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp27D3YV89 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Mmp27D3YV89 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp27D3YV89 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.51■□□□□ 0.23
Mmp27D3YV89 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp27D3YV89 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp27D3YV89 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp27D3YV89 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp27D3YV89 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.51■□□□□ 0.23
Mmp27D3YV89 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Mmp27D3YV89 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp27D3YV89 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp27D3YV89 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mmp27D3YV89 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp27D3YV89 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp27D3YV89 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Mmp27D3YV89 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp27D3YV89 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.5■□□□□ 0.23
Mmp27D3YV89 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.5■□□□□ 0.23
Mmp27D3YV89 Gm40881-201ENSMUST00000223397 166 ntBASIC16.5■□□□□ 0.23
Mmp27D3YV89 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp27D3YV89 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mmp27D3YV89 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.5■□□□□ 0.23
Mmp27D3YV89 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp27D3YV89 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp27D3YV89 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp27D3YV89 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp27D3YV89 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Mmp27D3YV89 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp27D3YV89 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Mmp27D3YV89 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp27D3YV89 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp27D3YV89 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.49■□□□□ 0.23
Mmp27D3YV89 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.49■□□□□ 0.23
Mmp27D3YV89 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp27D3YV89 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp27D3YV89 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Mmp27D3YV89 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp27D3YV89 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp27D3YV89 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp27D3YV89 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp27D3YV89 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp27D3YV89 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp27D3YV89 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.48■□□□□ 0.23
Mmp27D3YV89 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp27D3YV89 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp27D3YV89 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Mmp27D3YV89 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp27D3YV89 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp27D3YV89 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Mmp27D3YV89 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp27D3YV89 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.47■□□□□ 0.23
Mmp27D3YV89 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp27D3YV89 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Mmp27D3YV89 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.47■□□□□ 0.23
Mmp27D3YV89 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Mmp27D3YV89 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp27D3YV89 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp27D3YV89 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp27D3YV89 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.46■□□□□ 0.23
Mmp27D3YV89 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Mmp27D3YV89 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp27D3YV89 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp27D3YV89 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp27D3YV89 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp27D3YV89 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp27D3YV89 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Mmp27D3YV89 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp27D3YV89 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp27D3YV89 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp27D3YV89 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Mmp27D3YV89 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Mmp27D3YV89 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Mmp27D3YV89 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.45■□□□□ 0.22
Mmp27D3YV89 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp27D3YV89 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
Mmp27D3YV89 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp27D3YV89 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp27D3YV89 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp27D3YV89 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp27D3YV89 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp27D3YV89 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp27D3YV89 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.45■□□□□ 0.22
Mmp27D3YV89 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp27D3YV89 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp27D3YV89 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp27D3YV89 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp27D3YV89 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Mmp27D3YV89 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Mmp27D3YV89 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp27D3YV89 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.44■□□□□ 0.22
Mmp27D3YV89 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp27D3YV89 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms