Protein–RNA interactions for Protein: B1AWM0

Cnbd1, Cyclic nucleotide-binding domain-containing 1 (Fragment), mousemouse

Predictions only

Length 430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnbd1B1AWM0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
Cnbd1B1AWM0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.36■■□□□ 1.01
Cnbd1B1AWM0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cnbd1B1AWM0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Cnbd1B1AWM0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cnbd1B1AWM0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cnbd1B1AWM0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.35■■□□□ 1.01
Cnbd1B1AWM0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.35■■□□□ 1.01
Cnbd1B1AWM0 Mir6236-201ENSMUST00000184437 123 ntBASIC21.35■■□□□ 1.01
Cnbd1B1AWM0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cnbd1B1AWM0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cnbd1B1AWM0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cnbd1B1AWM0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cnbd1B1AWM0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Cnbd1B1AWM0 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.34■■□□□ 1.01
Cnbd1B1AWM0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cnbd1B1AWM0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.34■■□□□ 1.01
Cnbd1B1AWM0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
Cnbd1B1AWM0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cnbd1B1AWM0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cnbd1B1AWM0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Cnbd1B1AWM0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cnbd1B1AWM0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cnbd1B1AWM0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cnbd1B1AWM0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cnbd1B1AWM0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cnbd1B1AWM0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.33■■□□□ 1.01
Cnbd1B1AWM0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cnbd1B1AWM0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.32■■□□□ 1
Cnbd1B1AWM0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cnbd1B1AWM0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.32■■□□□ 1
Cnbd1B1AWM0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Cnbd1B1AWM0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.32■■□□□ 1
Cnbd1B1AWM0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cnbd1B1AWM0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cnbd1B1AWM0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Cnbd1B1AWM0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cnbd1B1AWM0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.31■■□□□ 1
Cnbd1B1AWM0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.31■■□□□ 1
Cnbd1B1AWM0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.31■■□□□ 1
Cnbd1B1AWM0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cnbd1B1AWM0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Cnbd1B1AWM0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cnbd1B1AWM0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Cnbd1B1AWM0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Cnbd1B1AWM0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cnbd1B1AWM0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cnbd1B1AWM0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cnbd1B1AWM0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Cnbd1B1AWM0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cnbd1B1AWM0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Cnbd1B1AWM0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cnbd1B1AWM0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cnbd1B1AWM0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cnbd1B1AWM0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cnbd1B1AWM0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.29■■□□□ 1
Cnbd1B1AWM0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cnbd1B1AWM0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cnbd1B1AWM0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Cnbd1B1AWM0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.29■■□□□ 1
Cnbd1B1AWM0 Gm9959-201ENSMUST00000068277 390 ntBASIC21.29■■□□□ 1
Cnbd1B1AWM0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cnbd1B1AWM0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cnbd1B1AWM0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cnbd1B1AWM0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Cnbd1B1AWM0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cnbd1B1AWM0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cnbd1B1AWM0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cnbd1B1AWM0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.28■■□□□ 1
Cnbd1B1AWM0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.28■■□□□ 1
Cnbd1B1AWM0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cnbd1B1AWM0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cnbd1B1AWM0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cnbd1B1AWM0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cnbd1B1AWM0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cnbd1B1AWM0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Cnbd1B1AWM0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cnbd1B1AWM0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
Cnbd1B1AWM0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cnbd1B1AWM0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cnbd1B1AWM0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cnbd1B1AWM0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Cnbd1B1AWM0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Cnbd1B1AWM0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cnbd1B1AWM0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cnbd1B1AWM0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Cnbd1B1AWM0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cnbd1B1AWM0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cnbd1B1AWM0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cnbd1B1AWM0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cnbd1B1AWM0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.26■□□□□ 0.99
Cnbd1B1AWM0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cnbd1B1AWM0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cnbd1B1AWM0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cnbd1B1AWM0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cnbd1B1AWM0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cnbd1B1AWM0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cnbd1B1AWM0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.25■□□□□ 0.99
Cnbd1B1AWM0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.25■□□□□ 0.99
Cnbd1B1AWM0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms