Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
IsxA1A546 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IsxA1A546 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IsxA1A546 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IsxA1A546 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
IsxA1A546 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IsxA1A546 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IsxA1A546 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
IsxA1A546 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IsxA1A546 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IsxA1A546 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IsxA1A546 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IsxA1A546 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IsxA1A546 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.22■□□□□ 0.51
IsxA1A546 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IsxA1A546 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IsxA1A546 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IsxA1A546 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IsxA1A546 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
IsxA1A546 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IsxA1A546 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IsxA1A546 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.21■□□□□ 0.51
IsxA1A546 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
IsxA1A546 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
IsxA1A546 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IsxA1A546 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
IsxA1A546 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.21■□□□□ 0.51
IsxA1A546 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IsxA1A546 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.21■□□□□ 0.51
IsxA1A546 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IsxA1A546 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
IsxA1A546 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
IsxA1A546 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
IsxA1A546 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
IsxA1A546 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IsxA1A546 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
IsxA1A546 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IsxA1A546 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.2■□□□□ 0.5
IsxA1A546 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
IsxA1A546 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
IsxA1A546 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.2■□□□□ 0.5
IsxA1A546 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IsxA1A546 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
IsxA1A546 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IsxA1A546 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IsxA1A546 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IsxA1A546 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
IsxA1A546 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
IsxA1A546 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
IsxA1A546 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IsxA1A546 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
IsxA1A546 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IsxA1A546 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IsxA1A546 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
IsxA1A546 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.18■□□□□ 0.5
IsxA1A546 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
IsxA1A546 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
IsxA1A546 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IsxA1A546 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
IsxA1A546 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
IsxA1A546 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IsxA1A546 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IsxA1A546 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
IsxA1A546 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
IsxA1A546 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.18■□□□□ 0.5
IsxA1A546 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IsxA1A546 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
IsxA1A546 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IsxA1A546 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IsxA1A546 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IsxA1A546 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IsxA1A546 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
IsxA1A546 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IsxA1A546 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IsxA1A546 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IsxA1A546 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IsxA1A546 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IsxA1A546 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
IsxA1A546 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IsxA1A546 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
IsxA1A546 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
IsxA1A546 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IsxA1A546 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
IsxA1A546 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IsxA1A546 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IsxA1A546 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.16■□□□□ 0.5
IsxA1A546 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IsxA1A546 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.16■□□□□ 0.5
IsxA1A546 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IsxA1A546 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IsxA1A546 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IsxA1A546 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
IsxA1A546 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
IsxA1A546 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IsxA1A546 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IsxA1A546 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IsxA1A546 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IsxA1A546 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IsxA1A546 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IsxA1A546 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms