Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav12-1A0N8R1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav12-1A0N8R1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trav12-1A0N8R1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav12-1A0N8R1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav12-1A0N8R1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav12-1A0N8R1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
Trav12-1A0N8R1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav12-1A0N8R1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Trav12-1A0N8R1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav12-1A0N8R1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav12-1A0N8R1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav12-1A0N8R1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav12-1A0N8R1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav12-1A0N8R1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav12-1A0N8R1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav12-1A0N8R1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.38■□□□□ 0.21
Trav12-1A0N8R1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.38■□□□□ 0.21
Trav12-1A0N8R1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav12-1A0N8R1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.38■□□□□ 0.21
Trav12-1A0N8R1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.38■□□□□ 0.21
Trav12-1A0N8R1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Trav12-1A0N8R1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav12-1A0N8R1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav12-1A0N8R1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12-1A0N8R1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12-1A0N8R1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12-1A0N8R1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12-1A0N8R1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12-1A0N8R1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav12-1A0N8R1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12-1A0N8R1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12-1A0N8R1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12-1A0N8R1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trav12-1A0N8R1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav12-1A0N8R1 Etf1-202ENSMUST00000180351 108 ntBASIC16.37■□□□□ 0.21
Trav12-1A0N8R1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12-1A0N8R1 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.37■□□□□ 0.21
Trav12-1A0N8R1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12-1A0N8R1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12-1A0N8R1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12-1A0N8R1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12-1A0N8R1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trav12-1A0N8R1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12-1A0N8R1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12-1A0N8R1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12-1A0N8R1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trav12-1A0N8R1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12-1A0N8R1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12-1A0N8R1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12-1A0N8R1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12-1A0N8R1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12-1A0N8R1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12-1A0N8R1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Trav12-1A0N8R1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav12-1A0N8R1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12-1A0N8R1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12-1A0N8R1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12-1A0N8R1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Trav12-1A0N8R1 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.35■□□□□ 0.21
Trav12-1A0N8R1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.35■□□□□ 0.21
Trav12-1A0N8R1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12-1A0N8R1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12-1A0N8R1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12-1A0N8R1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trav12-1A0N8R1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12-1A0N8R1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trav12-1A0N8R1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav12-1A0N8R1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav12-1A0N8R1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav12-1A0N8R1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trav12-1A0N8R1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav12-1A0N8R1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav12-1A0N8R1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Trav12-1A0N8R1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav12-1A0N8R1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
Trav12-1A0N8R1 Gm7417-201ENSMUST00000192950 473 ntBASIC16.33■□□□□ 0.2
Trav12-1A0N8R1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav12-1A0N8R1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav12-1A0N8R1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav12-1A0N8R1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav12-1A0N8R1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav12-1A0N8R1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trav12-1A0N8R1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav12-1A0N8R1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav12-1A0N8R1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav12-1A0N8R1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav12-1A0N8R1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav12-1A0N8R1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trav12-1A0N8R1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav12-1A0N8R1 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.32■□□□□ 0.2
Trav12-1A0N8R1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav12-1A0N8R1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav12-1A0N8R1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav12-1A0N8R1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav12-1A0N8R1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12-1A0N8R1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12-1A0N8R1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12-1A0N8R1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12-1A0N8R1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms