Protein–RNA interactions for Protein: A0A140T8N7

Igkv6-25, Immunoglobulin kappa chain variable 6-25 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-25A0A140T8N7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv6-25A0A140T8N7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv6-25A0A140T8N7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv6-25A0A140T8N7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Igkv6-25A0A140T8N7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv6-25A0A140T8N7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv6-25A0A140T8N7 AA386476-201ENSMUST00000098781 1665 ntBASIC18.48■□□□□ 0.55
Igkv6-25A0A140T8N7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Igkv6-25A0A140T8N7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.48■□□□□ 0.55
Igkv6-25A0A140T8N7 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.48■□□□□ 0.55
Igkv6-25A0A140T8N7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv6-25A0A140T8N7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv6-25A0A140T8N7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.48■□□□□ 0.55
Igkv6-25A0A140T8N7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv6-25A0A140T8N7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv6-25A0A140T8N7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv6-25A0A140T8N7 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.47■□□□□ 0.55
Igkv6-25A0A140T8N7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv6-25A0A140T8N7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Igkv6-25A0A140T8N7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv6-25A0A140T8N7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv6-25A0A140T8N7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv6-25A0A140T8N7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv6-25A0A140T8N7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv6-25A0A140T8N7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv6-25A0A140T8N7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Igkv6-25A0A140T8N7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv6-25A0A140T8N7 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv6-25A0A140T8N7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv6-25A0A140T8N7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv6-25A0A140T8N7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.45■□□□□ 0.54
Igkv6-25A0A140T8N7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv6-25A0A140T8N7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv6-25A0A140T8N7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv6-25A0A140T8N7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv6-25A0A140T8N7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv6-25A0A140T8N7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv6-25A0A140T8N7 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.44■□□□□ 0.54
Igkv6-25A0A140T8N7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv6-25A0A140T8N7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Igkv6-25A0A140T8N7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.44■□□□□ 0.54
Igkv6-25A0A140T8N7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv6-25A0A140T8N7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Igkv6-25A0A140T8N7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.44■□□□□ 0.54
Igkv6-25A0A140T8N7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.44■□□□□ 0.54
Igkv6-25A0A140T8N7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv6-25A0A140T8N7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv6-25A0A140T8N7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv6-25A0A140T8N7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.44■□□□□ 0.54
Igkv6-25A0A140T8N7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv6-25A0A140T8N7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv6-25A0A140T8N7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv6-25A0A140T8N7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv6-25A0A140T8N7 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.43■□□□□ 0.54
Igkv6-25A0A140T8N7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv6-25A0A140T8N7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv6-25A0A140T8N7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv6-25A0A140T8N7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv6-25A0A140T8N7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Igkv6-25A0A140T8N7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv6-25A0A140T8N7 Gm12933-201ENSMUST00000120203 872 ntBASIC18.42■□□□□ 0.54
Igkv6-25A0A140T8N7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Igkv6-25A0A140T8N7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Igkv6-25A0A140T8N7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Igkv6-25A0A140T8N7 Gm7514-201ENSMUST00000209475 934 ntBASIC18.42■□□□□ 0.54
Igkv6-25A0A140T8N7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.42■□□□□ 0.54
Igkv6-25A0A140T8N7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv6-25A0A140T8N7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv6-25A0A140T8N7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.42■□□□□ 0.54
Igkv6-25A0A140T8N7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv6-25A0A140T8N7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.41■□□□□ 0.54
Igkv6-25A0A140T8N7 Gm13146-201ENSMUST00000118508 780 ntBASIC18.41■□□□□ 0.54
Igkv6-25A0A140T8N7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv6-25A0A140T8N7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv6-25A0A140T8N7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv6-25A0A140T8N7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv6-25A0A140T8N7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Igkv6-25A0A140T8N7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv6-25A0A140T8N7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Igkv6-25A0A140T8N7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Igkv6-25A0A140T8N7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
Igkv6-25A0A140T8N7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv6-25A0A140T8N7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv6-25A0A140T8N7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Igkv6-25A0A140T8N7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv6-25A0A140T8N7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.4■□□□□ 0.54
Igkv6-25A0A140T8N7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv6-25A0A140T8N7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.4■□□□□ 0.54
Igkv6-25A0A140T8N7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv6-25A0A140T8N7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv6-25A0A140T8N7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv6-25A0A140T8N7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv6-25A0A140T8N7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv6-25A0A140T8N7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv6-25A0A140T8N7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv6-25A0A140T8N7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.54
Igkv6-25A0A140T8N7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv6-25A0A140T8N7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv6-25A0A140T8N7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv6-25A0A140T8N7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms