Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv1-88A0A140T8N1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv1-88A0A140T8N1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv1-88A0A140T8N1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv1-88A0A140T8N1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv1-88A0A140T8N1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv1-88A0A140T8N1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv1-88A0A140T8N1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv1-88A0A140T8N1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv1-88A0A140T8N1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC12.98□□□□□ -0.33
Igkv1-88A0A140T8N1 Gm5131-201ENSMUST00000212776 1238 ntBASIC12.98□□□□□ -0.33
Igkv1-88A0A140T8N1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv1-88A0A140T8N1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv1-88A0A140T8N1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv1-88A0A140T8N1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv1-88A0A140T8N1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igkv1-88A0A140T8N1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Igkv1-88A0A140T8N1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Igkv1-88A0A140T8N1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Igkv1-88A0A140T8N1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv1-88A0A140T8N1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv1-88A0A140T8N1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Igkv1-88A0A140T8N1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv1-88A0A140T8N1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC12.97□□□□□ -0.33
Igkv1-88A0A140T8N1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv1-88A0A140T8N1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv1-88A0A140T8N1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv1-88A0A140T8N1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv1-88A0A140T8N1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv1-88A0A140T8N1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Igkv1-88A0A140T8N1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC12.97□□□□□ -0.33
Igkv1-88A0A140T8N1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv1-88A0A140T8N1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Igkv1-88A0A140T8N1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Igkv1-88A0A140T8N1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv1-88A0A140T8N1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv1-88A0A140T8N1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv1-88A0A140T8N1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC12.96□□□□□ -0.33
Igkv1-88A0A140T8N1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Igkv1-88A0A140T8N1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC12.96□□□□□ -0.33
Igkv1-88A0A140T8N1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Igkv1-88A0A140T8N1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC12.96□□□□□ -0.34
Igkv1-88A0A140T8N1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Igkv1-88A0A140T8N1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Igkv1-88A0A140T8N1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Igkv1-88A0A140T8N1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Igkv1-88A0A140T8N1 Gm10620-201ENSMUST00000098379 1332 ntBASIC12.95□□□□□ -0.34
Igkv1-88A0A140T8N1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC12.95□□□□□ -0.34
Igkv1-88A0A140T8N1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Igkv1-88A0A140T8N1 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Igkv1-88A0A140T8N1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Igkv1-88A0A140T8N1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Igkv1-88A0A140T8N1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Igkv1-88A0A140T8N1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Igkv1-88A0A140T8N1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Igkv1-88A0A140T8N1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Igkv1-88A0A140T8N1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC12.95□□□□□ -0.34
Igkv1-88A0A140T8N1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Igkv1-88A0A140T8N1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Igkv1-88A0A140T8N1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Igkv1-88A0A140T8N1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC12.94□□□□□ -0.34
Igkv1-88A0A140T8N1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv1-88A0A140T8N1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv1-88A0A140T8N1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Igkv1-88A0A140T8N1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv1-88A0A140T8N1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv1-88A0A140T8N1 Gm43545-201ENSMUST00000196765 2779 ntBASIC12.94□□□□□ -0.34
Igkv1-88A0A140T8N1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv1-88A0A140T8N1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv1-88A0A140T8N1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv1-88A0A140T8N1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC12.94□□□□□ -0.34
Igkv1-88A0A140T8N1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv1-88A0A140T8N1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv1-88A0A140T8N1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC12.94□□□□□ -0.34
Igkv1-88A0A140T8N1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv1-88A0A140T8N1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv1-88A0A140T8N1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv1-88A0A140T8N1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv1-88A0A140T8N1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Igkv1-88A0A140T8N1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Igkv1-88A0A140T8N1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Igkv1-88A0A140T8N1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Igkv1-88A0A140T8N1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Igkv1-88A0A140T8N1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Igkv1-88A0A140T8N1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Igkv1-88A0A140T8N1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Igkv1-88A0A140T8N1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Igkv1-88A0A140T8N1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Igkv1-88A0A140T8N1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv1-88A0A140T8N1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv1-88A0A140T8N1 Gm16464-201ENSMUST00000117815 1095 ntBASIC12.92□□□□□ -0.34
Igkv1-88A0A140T8N1 Gm45444-201ENSMUST00000211394 898 ntBASIC12.92□□□□□ -0.34
Igkv1-88A0A140T8N1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv1-88A0A140T8N1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv1-88A0A140T8N1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv1-88A0A140T8N1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv1-88A0A140T8N1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Igkv1-88A0A140T8N1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv1-88A0A140T8N1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv1-88A0A140T8N1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms