Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-4A0A0G2JG37 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav9d-4A0A0G2JG37 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav9d-4A0A0G2JG37 Gm7332-201ENSMUST00000118351 454 ntBASIC13.44□□□□□ -0.26
Trav9d-4A0A0G2JG37 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav9d-4A0A0G2JG37 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav9d-4A0A0G2JG37 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-4A0A0G2JG37 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav9d-4A0A0G2JG37 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-4A0A0G2JG37 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-4A0A0G2JG37 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-4A0A0G2JG37 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav9d-4A0A0G2JG37 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-4A0A0G2JG37 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav9d-4A0A0G2JG37 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Trav9d-4A0A0G2JG37 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-4A0A0G2JG37 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-4A0A0G2JG37 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9d-4A0A0G2JG37 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9d-4A0A0G2JG37 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav9d-4A0A0G2JG37 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9d-4A0A0G2JG37 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9d-4A0A0G2JG37 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9d-4A0A0G2JG37 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav9d-4A0A0G2JG37 Gm11847-201ENSMUST00000125165 1119 ntBASIC13.43□□□□□ -0.26
Trav9d-4A0A0G2JG37 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9d-4A0A0G2JG37 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Trav9d-4A0A0G2JG37 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9d-4A0A0G2JG37 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav9d-4A0A0G2JG37 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9d-4A0A0G2JG37 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9d-4A0A0G2JG37 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav9d-4A0A0G2JG37 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9d-4A0A0G2JG37 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Trav9d-4A0A0G2JG37 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9d-4A0A0G2JG37 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9d-4A0A0G2JG37 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9d-4A0A0G2JG37 Gm27502-201ENSMUST00000183495 199 ntBASIC13.42□□□□□ -0.26
Trav9d-4A0A0G2JG37 Mir6538-201ENSMUST00000183713 110 ntBASIC13.42□□□□□ -0.26
Trav9d-4A0A0G2JG37 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9d-4A0A0G2JG37 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav9d-4A0A0G2JG37 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9d-4A0A0G2JG37 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9d-4A0A0G2JG37 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9d-4A0A0G2JG37 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9d-4A0A0G2JG37 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9d-4A0A0G2JG37 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav9d-4A0A0G2JG37 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9d-4A0A0G2JG37 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9d-4A0A0G2JG37 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9d-4A0A0G2JG37 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9d-4A0A0G2JG37 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9d-4A0A0G2JG37 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav9d-4A0A0G2JG37 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9d-4A0A0G2JG37 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9d-4A0A0G2JG37 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9d-4A0A0G2JG37 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9d-4A0A0G2JG37 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9d-4A0A0G2JG37 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9d-4A0A0G2JG37 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9d-4A0A0G2JG37 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9d-4A0A0G2JG37 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9d-4A0A0G2JG37 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav9d-4A0A0G2JG37 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9d-4A0A0G2JG37 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9d-4A0A0G2JG37 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9d-4A0A0G2JG37 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9d-4A0A0G2JG37 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav9d-4A0A0G2JG37 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC13.4□□□□□ -0.26
Trav9d-4A0A0G2JG37 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9d-4A0A0G2JG37 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9d-4A0A0G2JG37 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9d-4A0A0G2JG37 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9d-4A0A0G2JG37 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9d-4A0A0G2JG37 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9d-4A0A0G2JG37 Gm8093-201ENSMUST00000128935 1892 ntBASIC13.4□□□□□ -0.26
Trav9d-4A0A0G2JG37 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9d-4A0A0G2JG37 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9d-4A0A0G2JG37 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9d-4A0A0G2JG37 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9d-4A0A0G2JG37 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav9d-4A0A0G2JG37 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9d-4A0A0G2JG37 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9d-4A0A0G2JG37 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9d-4A0A0G2JG37 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9d-4A0A0G2JG37 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9d-4A0A0G2JG37 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC13.39□□□□□ -0.27
Trav9d-4A0A0G2JG37 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9d-4A0A0G2JG37 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9d-4A0A0G2JG37 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9d-4A0A0G2JG37 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9d-4A0A0G2JG37 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav9d-4A0A0G2JG37 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-4A0A0G2JG37 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-4A0A0G2JG37 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-4A0A0G2JG37 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-4A0A0G2JG37 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-4A0A0G2JG37 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-4A0A0G2JG37 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-4A0A0G2JG37 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms