Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav13d-4A0A0G2JFX3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-4A0A0G2JFX3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Gm43566-201ENSMUST00000196851 808 ntBASIC13.5□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Gm43909-201ENSMUST00000203443 1876 ntBASIC13.5□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-4A0A0G2JFX3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-4A0A0G2JFX3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Gm5921-201ENSMUST00000075898 882 ntBASIC13.49□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Hsf1-204ENSMUST00000226872 2104 ntBASIC13.48□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC13.48□□□□□ -0.25
Trav13d-4A0A0G2JFX3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC13.48□□□□□ -0.25
Trav13d-4A0A0G2JFX3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC13.48□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Gm10232-201ENSMUST00000089221 720 ntBASIC13.48□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13d-4A0A0G2JFX3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC13.47□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC13.46□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13d-4A0A0G2JFX3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms