Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC13.16□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Gm6802-201ENSMUST00000167843 1983 ntBASIC13.16□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ighv1-56A0A0A6YXG2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC13.15□□□□□ -0.3
Ighv1-56A0A0A6YXG2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC13.15□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-56A0A0A6YXG2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-56A0A0A6YXG2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Gm43530-201ENSMUST00000195920 274 ntBASIC13.14□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-56A0A0A6YXG2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC13.13□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC13.13□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Gm9870-201ENSMUST00000063874 645 ntBASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-56A0A0A6YXG2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ighv1-56A0A0A6YXG2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms