Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trbc1A0A0A6YWV4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbc1A0A0A6YWV4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Trbc1A0A0A6YWV4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Trbc1A0A0A6YWV4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbc1A0A0A6YWV4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18■□□□□ 0.47
Trbc1A0A0A6YWV4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trbc1A0A0A6YWV4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbc1A0A0A6YWV4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.99■□□□□ 0.47
Trbc1A0A0A6YWV4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbc1A0A0A6YWV4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbc1A0A0A6YWV4 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.99■□□□□ 0.47
Trbc1A0A0A6YWV4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbc1A0A0A6YWV4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Trbc1A0A0A6YWV4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trbc1A0A0A6YWV4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trbc1A0A0A6YWV4 Spcs1-204ENSMUST00000226782 949 ntBASIC17.99■□□□□ 0.47
Trbc1A0A0A6YWV4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trbc1A0A0A6YWV4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trbc1A0A0A6YWV4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.99■□□□□ 0.47
Trbc1A0A0A6YWV4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbc1A0A0A6YWV4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trbc1A0A0A6YWV4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.98■□□□□ 0.47
Trbc1A0A0A6YWV4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trbc1A0A0A6YWV4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbc1A0A0A6YWV4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trbc1A0A0A6YWV4 Gm6139-201ENSMUST00000079261 882 ntBASIC17.98■□□□□ 0.47
Trbc1A0A0A6YWV4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trbc1A0A0A6YWV4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trbc1A0A0A6YWV4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbc1A0A0A6YWV4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.97■□□□□ 0.47
Trbc1A0A0A6YWV4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trbc1A0A0A6YWV4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trbc1A0A0A6YWV4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Trbc1A0A0A6YWV4 Gm8493-201ENSMUST00000196881 489 ntBASIC17.97■□□□□ 0.47
Trbc1A0A0A6YWV4 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.97■□□□□ 0.47
Trbc1A0A0A6YWV4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbc1A0A0A6YWV4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trbc1A0A0A6YWV4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbc1A0A0A6YWV4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbc1A0A0A6YWV4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trbc1A0A0A6YWV4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbc1A0A0A6YWV4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbc1A0A0A6YWV4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trbc1A0A0A6YWV4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbc1A0A0A6YWV4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.96■□□□□ 0.47
Trbc1A0A0A6YWV4 Gm12251-201ENSMUST00000117893 792 ntBASIC17.96■□□□□ 0.47
Trbc1A0A0A6YWV4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbc1A0A0A6YWV4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbc1A0A0A6YWV4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.96■□□□□ 0.47
Trbc1A0A0A6YWV4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbc1A0A0A6YWV4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbc1A0A0A6YWV4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbc1A0A0A6YWV4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.96■□□□□ 0.47
Trbc1A0A0A6YWV4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbc1A0A0A6YWV4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trbc1A0A0A6YWV4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Trbc1A0A0A6YWV4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbc1A0A0A6YWV4 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.95■□□□□ 0.46
Trbc1A0A0A6YWV4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trbc1A0A0A6YWV4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbc1A0A0A6YWV4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbc1A0A0A6YWV4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.95■□□□□ 0.46
Trbc1A0A0A6YWV4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.95■□□□□ 0.46
Trbc1A0A0A6YWV4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbc1A0A0A6YWV4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trbc1A0A0A6YWV4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbc1A0A0A6YWV4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.95■□□□□ 0.46
Trbc1A0A0A6YWV4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbc1A0A0A6YWV4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbc1A0A0A6YWV4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.94■□□□□ 0.46
Trbc1A0A0A6YWV4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.94■□□□□ 0.46
Trbc1A0A0A6YWV4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbc1A0A0A6YWV4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbc1A0A0A6YWV4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbc1A0A0A6YWV4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbc1A0A0A6YWV4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbc1A0A0A6YWV4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.94■□□□□ 0.46
Trbc1A0A0A6YWV4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbc1A0A0A6YWV4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbc1A0A0A6YWV4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.94■□□□□ 0.46
Trbc1A0A0A6YWV4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Trbc1A0A0A6YWV4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbc1A0A0A6YWV4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbc1A0A0A6YWV4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trbc1A0A0A6YWV4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbc1A0A0A6YWV4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trbc1A0A0A6YWV4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbc1A0A0A6YWV4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.93■□□□□ 0.46
Trbc1A0A0A6YWV4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trbc1A0A0A6YWV4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbc1A0A0A6YWV4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbc1A0A0A6YWV4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbc1A0A0A6YWV4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbc1A0A0A6YWV4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbc1A0A0A6YWV4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbc1A0A0A6YWV4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
Trbc1A0A0A6YWV4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbc1A0A0A6YWV4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbc1A0A0A6YWV4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms