Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Mir6236-201ENSMUST00000184437 123 ntBASIC16.7■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.7■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.7■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Gm10232-201ENSMUST00000089221 720 ntBASIC16.7■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.69■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Gm13238-201ENSMUST00000117655 780 ntBASIC16.68■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Gm5921-201ENSMUST00000075898 882 ntBASIC16.67■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.66■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.64■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms