Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4n-4A0A075B615 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav4n-4A0A075B615 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4n-4A0A075B615 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav4n-4A0A075B615 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4n-4A0A075B615 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4n-4A0A075B615 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4n-4A0A075B615 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4n-4A0A075B615 Rarb-207ENSMUST00000225921 2756 ntBASIC13.66□□□□□ -0.22
Trav4n-4A0A075B615 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4n-4A0A075B615 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4n-4A0A075B615 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4n-4A0A075B615 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC13.65□□□□□ -0.22
Trav4n-4A0A075B615 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4n-4A0A075B615 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.65□□□□□ -0.22
Trav4n-4A0A075B615 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4n-4A0A075B615 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4n-4A0A075B615 Gm45141-201ENSMUST00000206502 1888 ntBASIC13.65□□□□□ -0.22
Trav4n-4A0A075B615 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.65□□□□□ -0.22
Trav4n-4A0A075B615 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4n-4A0A075B615 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4n-4A0A075B615 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav4n-4A0A075B615 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Trav4n-4A0A075B615 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4n-4A0A075B615 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav4n-4A0A075B615 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4n-4A0A075B615 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4n-4A0A075B615 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4n-4A0A075B615 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav4n-4A0A075B615 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC13.64□□□□□ -0.23
Trav4n-4A0A075B615 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4n-4A0A075B615 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4n-4A0A075B615 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4n-4A0A075B615 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4n-4A0A075B615 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav4n-4A0A075B615 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4n-4A0A075B615 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4n-4A0A075B615 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4n-4A0A075B615 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4n-4A0A075B615 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4n-4A0A075B615 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4n-4A0A075B615 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC13.63□□□□□ -0.23
Trav4n-4A0A075B615 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4n-4A0A075B615 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4n-4A0A075B615 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4n-4A0A075B615 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4n-4A0A075B615 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4n-4A0A075B615 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4n-4A0A075B615 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4n-4A0A075B615 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4n-4A0A075B615 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav4n-4A0A075B615 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4n-4A0A075B615 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4n-4A0A075B615 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav4n-4A0A075B615 Grk6-206ENSMUST00000224995 2971 ntBASIC13.62□□□□□ -0.23
Trav4n-4A0A075B615 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4n-4A0A075B615 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4n-4A0A075B615 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4n-4A0A075B615 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4n-4A0A075B615 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav4n-4A0A075B615 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trav4n-4A0A075B615 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4n-4A0A075B615 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4n-4A0A075B615 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4n-4A0A075B615 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4n-4A0A075B615 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4n-4A0A075B615 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4n-4A0A075B615 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav4n-4A0A075B615 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4n-4A0A075B615 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4n-4A0A075B615 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4n-4A0A075B615 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4n-4A0A075B615 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trav4n-4A0A075B615 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav4n-4A0A075B615 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Trav4n-4A0A075B615 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4n-4A0A075B615 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav4n-4A0A075B615 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4n-4A0A075B615 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4n-4A0A075B615 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4n-4A0A075B615 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4n-4A0A075B615 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4n-4A0A075B615 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4n-4A0A075B615 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.6□□□□□ -0.23
Trav4n-4A0A075B615 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4n-4A0A075B615 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4n-4A0A075B615 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4n-4A0A075B615 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC13.6□□□□□ -0.23
Trav4n-4A0A075B615 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4n-4A0A075B615 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4n-4A0A075B615 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4n-4A0A075B615 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4n-4A0A075B615 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav4n-4A0A075B615 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.6□□□□□ -0.23
Trav4n-4A0A075B615 Gm6802-201ENSMUST00000167843 1983 ntBASIC13.6□□□□□ -0.23
Trav4n-4A0A075B615 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4n-4A0A075B615 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav4n-4A0A075B615 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4n-4A0A075B615 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4n-4A0A075B615 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms