Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-6A0A075B603 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-6A0A075B603 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trav6-6A0A075B603 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-6A0A075B603 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav6-6A0A075B603 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Trav6-6A0A075B603 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-6A0A075B603 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6-6A0A075B603 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6-6A0A075B603 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6-6A0A075B603 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-6A0A075B603 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-6A0A075B603 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-6A0A075B603 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.58□□□□□ -0.08
Trav6-6A0A075B603 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-6A0A075B603 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-6A0A075B603 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.58□□□□□ -0.08
Trav6-6A0A075B603 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav6-6A0A075B603 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-6A0A075B603 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.58□□□□□ -0.08
Trav6-6A0A075B603 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-6A0A075B603 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-6A0A075B603 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-6A0A075B603 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav6-6A0A075B603 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-6A0A075B603 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-6A0A075B603 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-6A0A075B603 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-6A0A075B603 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-6A0A075B603 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-6A0A075B603 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-6A0A075B603 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav6-6A0A075B603 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-6A0A075B603 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-6A0A075B603 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-6A0A075B603 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-6A0A075B603 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-6A0A075B603 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-6A0A075B603 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-6A0A075B603 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav6-6A0A075B603 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-6A0A075B603 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Trav6-6A0A075B603 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-6A0A075B603 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav6-6A0A075B603 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-6A0A075B603 Gm10399-202ENSMUST00000202768 748 ntBASIC14.56□□□□□ -0.08
Trav6-6A0A075B603 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-6A0A075B603 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-6A0A075B603 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-6A0A075B603 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-6A0A075B603 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-6A0A075B603 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav6-6A0A075B603 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.56□□□□□ -0.08
Trav6-6A0A075B603 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-6A0A075B603 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav6-6A0A075B603 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-6A0A075B603 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav6-6A0A075B603 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav6-6A0A075B603 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-6A0A075B603 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav6-6A0A075B603 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-6A0A075B603 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-6A0A075B603 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-6A0A075B603 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.55□□□□□ -0.08
Trav6-6A0A075B603 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.55□□□□□ -0.08
Trav6-6A0A075B603 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.55□□□□□ -0.08
Trav6-6A0A075B603 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-6A0A075B603 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-6A0A075B603 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-6A0A075B603 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-6A0A075B603 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-6A0A075B603 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-6A0A075B603 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-6A0A075B603 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-6A0A075B603 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav6-6A0A075B603 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-6A0A075B603 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-6A0A075B603 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.54□□□□□ -0.08
Trav6-6A0A075B603 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-6A0A075B603 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav6-6A0A075B603 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav6-6A0A075B603 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-6A0A075B603 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-6A0A075B603 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.54□□□□□ -0.08
Trav6-6A0A075B603 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-6A0A075B603 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-6A0A075B603 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav6-6A0A075B603 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-6A0A075B603 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav6-6A0A075B603 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
Trav6-6A0A075B603 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-6A0A075B603 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav6-6A0A075B603 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-6A0A075B603 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-6A0A075B603 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-6A0A075B603 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-6A0A075B603 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-6A0A075B603 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-6A0A075B603 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav6-6A0A075B603 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms