Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm7672-201ENSMUST00000180915 872 ntBASIC9.47□□□□□ -0.89
Clrn1Q8K445 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Zfp572-201ENSMUST00000183674 1098 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Gm35299-201ENSMUST00000195865 421 ntTSL 3 BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC9.47□□□□□ -0.89
Clrn1Q8K445 AC157931.1-201ENSMUST00000198565 346 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Pf4-203ENSMUST00000202625 411 ntTSL 2 BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Gm44017-201ENSMUST00000203231 740 ntTSL 5 BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Gm6008-201ENSMUST00000206542 874 ntBASIC9.47□□□□□ -0.89
Clrn1Q8K445 CT009764.1-201ENSMUST00000222260 483 ntBASIC9.47□□□□□ -0.89
Clrn1Q8K445 AC107711.1-201ENSMUST00000227258 1295 ntBASIC9.47□□□□□ -0.89
Clrn1Q8K445 Gm5278-201ENSMUST00000055957 552 ntBASIC9.47□□□□□ -0.89
Clrn1Q8K445 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Gm4883-201ENSMUST00000085702 528 ntBASIC9.47□□□□□ -0.89
Clrn1Q8K445 Hdhd2-201ENSMUST00000026485 2357 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Limk1-202ENSMUST00000111233 3109 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Gm8725-201ENSMUST00000221829 1333 ntBASIC9.47□□□□□ -0.89
Clrn1Q8K445 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Fndc7-202ENSMUST00000102620 3477 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Mcm5-205ENSMUST00000212811 2653 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Clrn1Q8K445 Myt1l-205ENSMUST00000218583 4522 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Clrn1Q8K445 Tacc2-203ENSMUST00000084513 9029 ntAPPRIS P4 TSL 5 BASIC9.46□□□□□ -0.89
Clrn1Q8K445 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Clrn1Q8K445 Slco4c1-201ENSMUST00000071985 4908 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Clrn1Q8K445 Sypl-202ENSMUST00000076698 4999 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.89
Clrn1Q8K445 Abcc4-202ENSMUST00000166646 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Clrn1Q8K445 Nlrc5-204ENSMUST00000182409 4552 ntTSL 5 BASIC9.46□□□□□ -0.89
Clrn1Q8K445 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Clrn1Q8K445 Gm43813-201ENSMUST00000196847 2294 ntTSL 5 BASIC9.46□□□□□ -0.9
Clrn1Q8K445 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Gm24933-201ENSMUST00000103762 110 ntBASIC9.46□□□□□ -0.9
Clrn1Q8K445 Gm23252-201ENSMUST00000103776 110 ntBASIC9.46□□□□□ -0.9
Clrn1Q8K445 Gm12418-201ENSMUST00000118116 942 ntBASIC9.46□□□□□ -0.9
Clrn1Q8K445 Gm11929-201ENSMUST00000118175 945 ntBASIC9.46□□□□□ -0.9
Clrn1Q8K445 Gm16209-201ENSMUST00000118457 627 ntBASIC9.46□□□□□ -0.9
Clrn1Q8K445 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Gm10171-201ENSMUST00000126220 628 ntBASIC9.46□□□□□ -0.9
Clrn1Q8K445 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Mir1941-201ENSMUST00000157834 83 ntBASIC9.46□□□□□ -0.9
Clrn1Q8K445 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Gm26443-201ENSMUST00000179610 110 ntBASIC9.46□□□□□ -0.9
Clrn1Q8K445 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC9.46□□□□□ -0.9
Clrn1Q8K445 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC9.46□□□□□ -0.9
Clrn1Q8K445 AC124457.1-201ENSMUST00000198845 120 ntBASIC9.46□□□□□ -0.9
Clrn1Q8K445 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Gm18862-201ENSMUST00000204643 933 ntBASIC9.46□□□□□ -0.9
Clrn1Q8K445 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Clrn1Q8K445 4931431B13Rik-202ENSMUST00000205646 473 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Gm7344-201ENSMUST00000212122 1222 ntBASIC9.46□□□□□ -0.9
Clrn1Q8K445 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC9.46□□□□□ -0.9
Clrn1Q8K445 AC133496.1-201ENSMUST00000223891 743 ntBASIC9.46□□□□□ -0.9
Clrn1Q8K445 1700063H04Rik-201ENSMUST00000043553 817 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Clrn1Q8K445 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC9.46□□□□□ -0.9
Clrn1Q8K445 Olfr1328-201ENSMUST00000081960 944 ntAPPRIS P2 BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Gm10233-201ENSMUST00000089275 628 ntBASIC9.46□□□□□ -0.9
Clrn1Q8K445 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Hnrnpc-201ENSMUST00000111610 2847 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Hnrnpc-202ENSMUST00000164655 2843 ntTSL 5 BASIC9.46□□□□□ -0.9
Clrn1Q8K445 BC051665-201ENSMUST00000026078 1348 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Stxbp5l-203ENSMUST00000114780 3476 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Ebf3-205ENSMUST00000209578 1863 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Zfp112-201ENSMUST00000005413 3044 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Slc9b2-201ENSMUST00000051849 4818 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Gm10344-201ENSMUST00000193498 1419 ntBASIC9.46□□□□□ -0.9
Clrn1Q8K445 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Gm45089-201ENSMUST00000208082 2040 ntBASIC9.46□□□□□ -0.9
Clrn1Q8K445 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Gm21969-201ENSMUST00000178644 4402 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Slc5a4a-201ENSMUST00000020450 2055 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Pex5l-204ENSMUST00000108224 2721 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Gm7356-201ENSMUST00000186636 1527 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Gm7358-201ENSMUST00000189454 1527 ntBASIC9.46□□□□□ -0.9
Clrn1Q8K445 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Clrn1Q8K445 Gm44070-201ENSMUST00000203389 2220 ntBASIC9.46□□□□□ -0.9
Clrn1Q8K445 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Ube2q1-202ENSMUST00000196726 1650 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Lnpk-201ENSMUST00000064503 3195 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Sh3pxd2b-201ENSMUST00000038753 7413 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Gm44664-201ENSMUST00000206841 1786 ntBASIC9.45□□□□□ -0.9
Clrn1Q8K445 Drc3-203ENSMUST00000108722 1858 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Clrn1Q8K445 Tiam1-201ENSMUST00000002588 7290 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms