Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Rad51b-201ENSMUST00000079533 1759 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim63Q38HM4 Stxbp5l-206ENSMUST00000114787 4394 ntAPPRIS P3 TSL 5 BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Atp2a1-201ENSMUST00000032974 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Pdgfra-208ENSMUST00000202681 2876 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Scmh1-204ENSMUST00000106301 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Gm44933-201ENSMUST00000208637 1987 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Igbp1-201ENSMUST00000033570 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Gm9915-201ENSMUST00000066196 1383 ntBASIC8.24□□□□□ -1.09
Trim63Q38HM4 Gm28758-201ENSMUST00000186123 2167 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Plbd1-201ENSMUST00000032336 2010 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Zfp354a-201ENSMUST00000020628 1719 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 AC104200.1-201ENSMUST00000224527 1746 ntBASIC8.24□□□□□ -1.09
Trim63Q38HM4 Prdm15-201ENSMUST00000095849 6346 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Gm14644-201ENSMUST00000116671 647 ntBASIC8.24□□□□□ -1.09
Trim63Q38HM4 Gm12247-201ENSMUST00000117585 670 ntBASIC8.24□□□□□ -1.09
Trim63Q38HM4 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Gm13316-201ENSMUST00000140537 691 ntBASIC8.24□□□□□ -1.09
Trim63Q38HM4 Gm23958-201ENSMUST00000157207 105 ntBASIC8.24□□□□□ -1.09
Trim63Q38HM4 Gm24548-201ENSMUST00000158650 108 ntBASIC8.24□□□□□ -1.09
Trim63Q38HM4 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Gm7583-201ENSMUST00000182941 1005 ntBASIC8.24□□□□□ -1.09
Trim63Q38HM4 Gm27682-201ENSMUST00000183930 110 ntBASIC8.24□□□□□ -1.09
Trim63Q38HM4 Gm27839-201ENSMUST00000184242 106 ntBASIC8.24□□□□□ -1.09
Trim63Q38HM4 Gm29127-201ENSMUST00000188304 517 ntBASIC8.24□□□□□ -1.09
Trim63Q38HM4 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Gm37976-201ENSMUST00000193827 345 ntBASIC8.24□□□□□ -1.09
Trim63Q38HM4 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Gm9908-201ENSMUST00000211534 448 ntBASIC8.24□□□□□ -1.09
Trim63Q38HM4 AC113082.1-201ENSMUST00000217324 327 ntBASIC8.24□□□□□ -1.09
Trim63Q38HM4 Gm4935-201ENSMUST00000221316 1198 ntBASIC8.24□□□□□ -1.09
Trim63Q38HM4 AC113031.8-201ENSMUST00000227856 631 ntBASIC8.24□□□□□ -1.09
Trim63Q38HM4 Mkl2-202ENSMUST00000056715 618 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Gm3712-201ENSMUST00000118523 2071 ntBASIC8.24□□□□□ -1.09
Trim63Q38HM4 Smim7-203ENSMUST00000167290 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Srbd1-201ENSMUST00000095187 3530 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Gm44187-201ENSMUST00000204735 1929 ntBASIC8.24□□□□□ -1.09
Trim63Q38HM4 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Ppp1r12a-201ENSMUST00000070663 3403 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Grk3-201ENSMUST00000065167 6533 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 1700123J17Rik-201ENSMUST00000206035 1805 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Tert-201ENSMUST00000022104 4313 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim63Q38HM4 5430427N15Rik-201ENSMUST00000200007 2393 ntBASIC8.24□□□□□ -1.09
Trim63Q38HM4 Tex9-201ENSMUST00000085358 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Lancl1-201ENSMUST00000027149 4270 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Gm20518-201ENSMUST00000150068 3811 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Cbwd1-201ENSMUST00000025815 1944 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Dhrs7b-201ENSMUST00000042281 1553 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Cdk15-202ENSMUST00000160662 2108 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim63Q38HM4 C6-203ENSMUST00000162350 2874 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Gm11548-201ENSMUST00000140203 2199 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim63Q38HM4 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Gm1335-201ENSMUST00000121653 386 ntBASIC8.23□□□□□ -1.09
Trim63Q38HM4 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Gzmg-201ENSMUST00000015578 909 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim63Q38HM4 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms