Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Arhgap12-201ENSMUST00000062584 2718 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Rnft1-201ENSMUST00000020827 4452 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Blnk-201ENSMUST00000054769 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Gm42587-201ENSMUST00000198462 1981 ntBASIC8.28□□□□□ -1.08
Trim63Q38HM4 Zfp386-201ENSMUST00000073551 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Grik1-206ENSMUST00000211444 3528 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Nobox-201ENSMUST00000031749 1893 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Myo1g-201ENSMUST00000003459 3307 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim63Q38HM4 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Trim63Q38HM4 Tdrd1-204ENSMUST00000121249 5047 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Trim63Q38HM4 Tec-202ENSMUST00000073843 2573 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Trim63Q38HM4 Samhd1-201ENSMUST00000057725 3926 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.08
Trim63Q38HM4 Syna-201ENSMUST00000149604 2026 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Gm26785-201ENSMUST00000181775 2914 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Npy4r-201ENSMUST00000052164 3627 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Ano4-204ENSMUST00000182341 3959 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Gm10513-201ENSMUST00000194203 6468 ntBASIC8.27□□□□□ -1.09
Trim63Q38HM4 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Gm44013-201ENSMUST00000204392 2262 ntBASIC8.27□□□□□ -1.09
Trim63Q38HM4 Rbm25-201ENSMUST00000048155 4226 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Gm5822-201ENSMUST00000161562 1378 ntBASIC8.27□□□□□ -1.09
Trim63Q38HM4 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Synj1-210ENSMUST00000170853 7012 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Dhx35-201ENSMUST00000029186 3212 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Il1rl1-202ENSMUST00000097772 5302 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Gm26286-201ENSMUST00000104166 134 ntBASIC8.27□□□□□ -1.09
Trim63Q38HM4 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Gm17090-201ENSMUST00000171768 490 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim63Q38HM4 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Gm27847-201ENSMUST00000183711 107 ntBASIC8.27□□□□□ -1.09
Trim63Q38HM4 Gm27375-201ENSMUST00000183799 107 ntBASIC8.27□□□□□ -1.09
Trim63Q38HM4 Gm27892-201ENSMUST00000185017 106 ntBASIC8.27□□□□□ -1.09
Trim63Q38HM4 Gm37444-201ENSMUST00000193605 439 ntBASIC8.27□□□□□ -1.09
Trim63Q38HM4 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC8.27□□□□□ -1.09
Trim63Q38HM4 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Gm18042-201ENSMUST00000219887 790 ntBASIC8.27□□□□□ -1.09
Trim63Q38HM4 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim63Q38HM4 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Gm17415-201ENSMUST00000096427 789 ntBASIC8.27□□□□□ -1.09
Trim63Q38HM4 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Ipo11-202ENSMUST00000080856 4325 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Cd22-201ENSMUST00000019248 3974 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Gucy2d-201ENSMUST00000098274 3537 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Arhgef15-201ENSMUST00000065040 4123 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Rnf111-202ENSMUST00000113595 4735 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Gm28906-201ENSMUST00000191371 1779 ntBASIC8.27□□□□□ -1.09
Trim63Q38HM4 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Nefm-201ENSMUST00000022638 3334 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Tnfrsf1b-201ENSMUST00000030336 3818 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Pnpla7-201ENSMUST00000045295 4574 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Sun1-201ENSMUST00000058716 4134 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim63Q38HM4 Slc5a4a-201ENSMUST00000020450 2055 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Gm43323-201ENSMUST00000202328 4258 ntBASIC8.26□□□□□ -1.09
Trim63Q38HM4 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Gm20735-201ENSMUST00000212077 1979 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Il1rl2-201ENSMUST00000095020 1950 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Zwilch-201ENSMUST00000122091 2957 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Dad1-202ENSMUST00000128231 3491 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Ccdc116-201ENSMUST00000023452 4210 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Gm15066-201ENSMUST00000120163 2608 ntBASIC8.26□□□□□ -1.09
Trim63Q38HM4 Dpf3-207ENSMUST00000178756 3135 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Hdhd2-201ENSMUST00000026485 2357 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Lrrcc1-201ENSMUST00000091325 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Smcr8-202ENSMUST00000102667 3544 ntBASIC8.26□□□□□ -1.09
Trim63Q38HM4 Phc1-202ENSMUST00000081849 3683 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Tspan6-201ENSMUST00000087557 1765 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Gm6727-201ENSMUST00000204102 1518 ntBASIC8.26□□□□□ -1.09
Trim63Q38HM4 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Asph-208ENSMUST00000108334 2685 ntTSL 5 BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Arhgef10l-205ENSMUST00000105798 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim63Q38HM4 Gm15207-201ENSMUST00000119259 442 ntBASIC8.26□□□□□ -1.09
Trim63Q38HM4 Gm4986-201ENSMUST00000119731 549 ntBASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms