Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nod1Q8BHB0 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nod1Q8BHB0 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nod1Q8BHB0 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nod1Q8BHB0 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nod1Q8BHB0 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nod1Q8BHB0 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nod1Q8BHB0 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nod1Q8BHB0 Gm43585-201ENSMUST00000199375 1403 ntBASIC10.74□□□□□ -0.69
Nod1Q8BHB0 Gm44547-201ENSMUST00000207793 1446 ntBASIC10.74□□□□□ -0.69
Nod1Q8BHB0 Gm43362-201ENSMUST00000198192 2470 ntBASIC10.74□□□□□ -0.69
Nod1Q8BHB0 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nod1Q8BHB0 Zdhhc9-201ENSMUST00000037960 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nod1Q8BHB0 Kirrel3-205ENSMUST00000187182 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nod1Q8BHB0 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nod1Q8BHB0 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.74□□□□□ -0.69
Nod1Q8BHB0 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nod1Q8BHB0 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nod1Q8BHB0 Gm16486-201ENSMUST00000212436 4584 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Nod1Q8BHB0 Ribc1-201ENSMUST00000026288 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nod1Q8BHB0 Zeb2-215ENSMUST00000200844 4064 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nod1Q8BHB0 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Btg1-201ENSMUST00000038377 5001 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Gm43817-201ENSMUST00000196459 2262 ntBASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Pcdhb20-201ENSMUST00000052179 3559 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Gm12684-201ENSMUST00000118675 999 ntBASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Gm5054-201ENSMUST00000119351 453 ntBASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Gm15798-201ENSMUST00000120082 408 ntBASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Gm28309-201ENSMUST00000136302 623 ntTSL 5 BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Rnasek-203ENSMUST00000141880 465 ntTSL 2 BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Igkv4-54-201ENSMUST00000177697 288 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Gm34780-201ENSMUST00000193896 949 ntBASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Gm43452-201ENSMUST00000201873 991 ntBASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Gm18391-201ENSMUST00000217189 658 ntBASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Ces1a-201ENSMUST00000095211 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Gm37582-201ENSMUST00000192953 1409 ntBASIC10.73□□□□□ -0.69
Nod1Q8BHB0 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Adamts13-202ENSMUST00000102891 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Gm17644-201ENSMUST00000181272 3200 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 4930455D15Rik-201ENSMUST00000181632 1616 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Nod1Q8BHB0 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Slc7a9-203ENSMUST00000118969 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Zfp532-201ENSMUST00000049016 5503 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Acvr1-203ENSMUST00000112599 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Cct2-201ENSMUST00000047672 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Ctc1-211ENSMUST00000161455 3989 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Syna-201ENSMUST00000149604 2026 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Fmo3-201ENSMUST00000028010 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Pml-201ENSMUST00000085673 4481 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Il24-201ENSMUST00000121040 1159 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Gm12035-201ENSMUST00000121890 623 ntBASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Mir1896-201ENSMUST00000122641 81 ntBASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Gm11947-201ENSMUST00000125275 273 ntTSL 3 BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Gm23757-201ENSMUST00000158353 100 ntBASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Gm17147-201ENSMUST00000164176 432 ntBASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Siglech-208ENSMUST00000173835 833 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Pkib-204ENSMUST00000175852 731 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Gm24180-201ENSMUST00000179961 110 ntBASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Gm16008-203ENSMUST00000181389 480 ntTSL 3 BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Gm6463-201ENSMUST00000182090 966 ntBASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Gm29617-201ENSMUST00000185730 610 ntBASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Gm2021-201ENSMUST00000190623 464 ntBASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nod1Q8BHB0 Gm44139-201ENSMUST00000204903 373 ntBASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms