Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm14654-201ENSMUST00000118620 447 ntBASIC12.19□□□□□ -0.46
Vps54Q5SPW0 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Gm13898-201ENSMUST00000141865 610 ntBASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Gm24294-201ENSMUST00000158295 277 ntBASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Gm3752-202ENSMUST00000167833 450 ntTSL 5 BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Gm10128-201ENSMUST00000171360 615 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Gm2956-202ENSMUST00000178722 450 ntTSL 5 BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Gm10340-202ENSMUST00000188235 615 ntTSL 5 BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 AC154461.1-201ENSMUST00000224207 1005 ntBASIC12.19□□□□□ -0.46
Vps54Q5SPW0 AC107711.1-201ENSMUST00000227258 1295 ntBASIC12.19□□□□□ -0.46
Vps54Q5SPW0 AC123533.3-201ENSMUST00000228056 454 ntBASIC12.19□□□□□ -0.46
Vps54Q5SPW0 1700063H04Rik-201ENSMUST00000043553 817 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Olfr1384-201ENSMUST00000060434 1034 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Crip1-201ENSMUST00000006523 445 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Gm4778-201ENSMUST00000098878 1098 ntBASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Isx-201ENSMUST00000034034 1793 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Pfkfb3-216ENSMUST00000191668 2216 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Eftud2-212ENSMUST00000173679 2889 ntTSL 5 BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 5830473C10Rik-202ENSMUST00000200765 1691 ntTSL 5 BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Ctse-201ENSMUST00000073350 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Wdr37-212ENSMUST00000176922 3780 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Amer3-201ENSMUST00000052670 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Trim9-211ENSMUST00000223160 3574 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Pla2g5-202ENSMUST00000102511 690 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Gm13171-201ENSMUST00000117233 391 ntBASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Gm8864-201ENSMUST00000118653 1010 ntBASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Gm11947-201ENSMUST00000125275 273 ntTSL 3 BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Gm25604-201ENSMUST00000158359 133 ntBASIC12.18□□□□□ -0.46
Vps54Q5SPW0 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Gm5335-201ENSMUST00000182995 1000 ntBASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Mir7088-201ENSMUST00000184227 86 ntBASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Cox7a1-202ENSMUST00000208441 485 ntTSL 2 BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Cxcl3-201ENSMUST00000031326 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Gm9701-201ENSMUST00000077976 427 ntBASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Gm42427-201ENSMUST00000200473 5292 ntBASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Osbpl1a-204ENSMUST00000119043 2522 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Tle3-217ENSMUST00000162973 4114 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps54Q5SPW0 Sfi1-203ENSMUST00000101655 3888 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Npas4-201ENSMUST00000056129 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Ebf3-205ENSMUST00000209578 1863 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Cpsf3-211ENSMUST00000222968 1858 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Ighv6-3-201ENSMUST00000103486 356 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Ighv6-6-201ENSMUST00000103489 357 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Gm14239-201ENSMUST00000116491 685 ntBASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Gm6939-201ENSMUST00000122029 864 ntBASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Gm11513-201ENSMUST00000138855 751 ntTSL 5 BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Gm8955-201ENSMUST00000182945 1008 ntBASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Gm18646-201ENSMUST00000212240 1063 ntBASIC12.17□□□□□ -0.46
Vps54Q5SPW0 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Gm7125-201ENSMUST00000093430 273 ntBASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Pex5-203ENSMUST00000112530 3051 ntTSL 5 BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Igf2bp2-202ENSMUST00000115379 3078 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps54Q5SPW0 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms