Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC8.87□□□□□ -0.99
Cd28P31041 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC8.87□□□□□ -0.99
Cd28P31041 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC8.87□□□□□ -0.99
Cd28P31041 Gm5178-201ENSMUST00000219380 898 ntBASIC8.87□□□□□ -0.99
Cd28P31041 AC153152.3-201ENSMUST00000222188 1135 ntBASIC8.87□□□□□ -0.99
Cd28P31041 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Cd28P31041 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Cd28P31041 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cd28P31041 1700110I01Rik-202ENSMUST00000112812 1737 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cd28P31041 Gm26911-201ENSMUST00000181770 1737 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cd28P31041 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cd28P31041 Msh4-203ENSMUST00000188338 2802 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
Cd28P31041 Ctnnd1-218ENSMUST00000111692 6170 ntAPPRIS ALT1 TSL 5 BASIC8.87□□□□□ -0.99
Cd28P31041 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Cd28P31041 Apex2-203ENSMUST00000112720 4742 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
Cd28P31041 Dync1i1-201ENSMUST00000115554 2518 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Cd28P31041 Rufy3-202ENSMUST00000196686 2077 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Cd28P31041 AC138284.4-201ENSMUST00000216704 2882 ntBASIC8.87□□□□□ -0.99
Cd28P31041 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cd28P31041 Rimbp2-207ENSMUST00000200470 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cd28P31041 Adar-202ENSMUST00000098924 5909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cd28P31041 Sntg1-207ENSMUST00000140295 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cd28P31041 Tecpr2-202ENSMUST00000169597 7780 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cd28P31041 Crat-203ENSMUST00000102855 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cd28P31041 Hdac7-203ENSMUST00000116408 4226 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cd28P31041 Pwp1-201ENSMUST00000001836 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cd28P31041 Gm42633-201ENSMUST00000198853 2764 ntBASIC8.86□□□□□ -0.99
Cd28P31041 D5Ertd579e-201ENSMUST00000031091 6677 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Cd28P31041 Ano4-204ENSMUST00000182341 3959 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
Cd28P31041 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cd28P31041 Gm10608-201ENSMUST00000093527 2509 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Cd28P31041 Ephb4-205ENSMUST00000166239 3741 ntAPPRIS P3 TSL 5 BASIC8.86□□□□□ -0.99
Cd28P31041 Cald1-204ENSMUST00000115026 4080 ntTSL 5 BASIC8.86□□□□□ -0.99
Cd28P31041 Clec4f-201ENSMUST00000014686 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cd28P31041 Specc1l-202ENSMUST00000105421 6632 ntTSL 5 BASIC8.86□□□□□ -0.99
Cd28P31041 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cd28P31041 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cd28P31041 Src-205ENSMUST00000109533 3813 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cd28P31041 Gm15602-201ENSMUST00000116162 465 ntBASIC8.86□□□□□ -0.99
Cd28P31041 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cd28P31041 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC8.86□□□□□ -0.99
Cd28P31041 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cd28P31041 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
Cd28P31041 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cd28P31041 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC8.86□□□□□ -0.99
Cd28P31041 Gm7525-201ENSMUST00000219425 454 ntBASIC8.86□□□□□ -0.99
Cd28P31041 CT030637.1-201ENSMUST00000228016 669 ntBASIC8.86□□□□□ -0.99
Cd28P31041 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Cd28P31041 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cd28P31041 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cd28P31041 Abcc5-204ENSMUST00000115547 5372 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Cd28P31041 Gm43764-201ENSMUST00000202553 3172 ntBASIC8.86□□□□□ -0.99
Cd28P31041 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cd28P31041 Slc25a14-204ENSMUST00000134257 1805 ntAPPRIS ALT1 TSL 5 BASIC8.86□□□□□ -0.99
Cd28P31041 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cd28P31041 Tmem135-201ENSMUST00000041968 3700 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cd28P31041 Olfr484-202ENSMUST00000214722 4676 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Cd28P31041 Uox-201ENSMUST00000029837 2737 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cd28P31041 C820005J03Rik-201ENSMUST00000195997 2312 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Cd28P31041 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Cd28P31041 Gm43318-201ENSMUST00000199939 1949 ntBASIC8.86□□□□□ -0.99
Cd28P31041 Hacl1-214ENSMUST00000167175 1739 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Cd28P31041 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Cd28P31041 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cd28P31041 Gm15666-202ENSMUST00000219490 2796 ntBASIC8.85□□□□□ -0.99
Cd28P31041 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cd28P31041 CT010575.1-201ENSMUST00000220666 2924 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Cd28P31041 Atg13-201ENSMUST00000028678 3604 ntTSL 5 BASIC8.85□□□□□ -0.99
Cd28P31041 Mepe-201ENSMUST00000066207 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cd28P31041 Umodl1-201ENSMUST00000066554 5007 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cd28P31041 Adgrf4-201ENSMUST00000024711 3060 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cd28P31041 Nrip3-202ENSMUST00000041460 3927 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Cd28P31041 Eif4e2-201ENSMUST00000050876 2869 ntTSL 5 BASIC8.85□□□□□ -0.99
Cd28P31041 Zfyve16-201ENSMUST00000022217 6150 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cd28P31041 2410089E03Rik-201ENSMUST00000110617 10469 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Cd28P31041 Fxr1-208ENSMUST00000200392 3014 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Cd28P31041 Actn1-202ENSMUST00000167327 2664 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Cd28P31041 Gm7208-202ENSMUST00000212442 1627 ntBASIC8.85□□□□□ -0.99
Cd28P31041 Thap2-201ENSMUST00000020346 3681 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Cd28P31041 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Cd28P31041 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC8.85□□□□□ -0.99
Cd28P31041 Gm6500-201ENSMUST00000119412 451 ntBASIC8.85□□□□□ -0.99
Cd28P31041 Gm13022-201ENSMUST00000121181 285 ntBASIC8.85□□□□□ -0.99
Cd28P31041 Gm16288-201ENSMUST00000137940 367 ntBASIC8.85□□□□□ -0.99
Cd28P31041 Lsm6-204ENSMUST00000146824 541 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
Cd28P31041 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Cd28P31041 Disp1-202ENSMUST00000171366 4687 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cd28P31041 Sox2ot-211ENSMUST00000197977 2970 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Cd28P31041 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC8.85□□□□□ -0.99
Cd28P31041 Gm45592-201ENSMUST00000209605 1043 ntBASIC8.85□□□□□ -0.99
Cd28P31041 Gm45258-201ENSMUST00000210042 853 ntBASIC8.85□□□□□ -0.99
Cd28P31041 Gm2875-201ENSMUST00000211333 360 ntBASIC8.85□□□□□ -0.99
Cd28P31041 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC8.85□□□□□ -0.99
Cd28P31041 AC153505.1-201ENSMUST00000218819 1071 ntBASIC8.85□□□□□ -0.99
Cd28P31041 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cd28P31041 AC134439.3-201ENSMUST00000223486 851 ntTSL 5 BASIC8.85□□□□□ -0.99
Cd28P31041 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC8.85□□□□□ -0.99
Cd28P31041 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cd28P31041 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cd28P31041 Gm10053-201ENSMUST00000073080 949 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms