Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm5538W4VSP6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm5538W4VSP6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm5538W4VSP6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Gm5538W4VSP6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.21■□□□□ 0.83
Gm5538W4VSP6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm5538W4VSP6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm5538W4VSP6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm5538W4VSP6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm5538W4VSP6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Gm5538W4VSP6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm5538W4VSP6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm5538W4VSP6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm5538W4VSP6 Gm12251-201ENSMUST00000117893 792 ntBASIC20.2■□□□□ 0.82
Gm5538W4VSP6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Gm5538W4VSP6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Gm5538W4VSP6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm5538W4VSP6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm5538W4VSP6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5538W4VSP6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5538W4VSP6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5538W4VSP6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5538W4VSP6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5538W4VSP6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5538W4VSP6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Gm5538W4VSP6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5538W4VSP6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5538W4VSP6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5538W4VSP6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.18■□□□□ 0.82
Gm5538W4VSP6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.18■□□□□ 0.82
Gm5538W4VSP6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5538W4VSP6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5538W4VSP6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5538W4VSP6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5538W4VSP6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5538W4VSP6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Gm5538W4VSP6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5538W4VSP6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5538W4VSP6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5538W4VSP6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Gm5538W4VSP6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Gm5538W4VSP6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.17■□□□□ 0.82
Gm5538W4VSP6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5538W4VSP6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5538W4VSP6 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.16■□□□□ 0.82
Gm5538W4VSP6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5538W4VSP6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Gm5538W4VSP6 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.15■□□□□ 0.82
Gm5538W4VSP6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Gm5538W4VSP6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5538W4VSP6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Gm5538W4VSP6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5538W4VSP6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Gm5538W4VSP6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5538W4VSP6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5538W4VSP6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5538W4VSP6 Gm27454-201ENSMUST00000185090 204 ntBASIC20.14■□□□□ 0.81
Gm5538W4VSP6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5538W4VSP6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5538W4VSP6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5538W4VSP6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Gm5538W4VSP6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm5538W4VSP6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Gm5538W4VSP6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Gm5538W4VSP6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm5538W4VSP6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.13■□□□□ 0.81
Gm5538W4VSP6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.13■□□□□ 0.81
Gm5538W4VSP6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gm5538W4VSP6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm5538W4VSP6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gm5538W4VSP6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Gm5538W4VSP6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5538W4VSP6 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Gm5538W4VSP6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5538W4VSP6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5538W4VSP6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5538W4VSP6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5538W4VSP6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5538W4VSP6 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.12■□□□□ 0.81
Gm5538W4VSP6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Gm5538W4VSP6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5538W4VSP6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm5538W4VSP6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm5538W4VSP6 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm5538W4VSP6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Gm5538W4VSP6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm5538W4VSP6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm5538W4VSP6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm5538W4VSP6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm5538W4VSP6 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm5538W4VSP6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.1■□□□□ 0.81
Gm5538W4VSP6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm5538W4VSP6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm5538W4VSP6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm5538W4VSP6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm5538W4VSP6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm5538W4VSP6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm5538W4VSP6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm5538W4VSP6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm5538W4VSP6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms