Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H2afb3S4R1G7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H2afb3S4R1G7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
H2afb3S4R1G7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H2afb3S4R1G7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H2afb3S4R1G7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
H2afb3S4R1G7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H2afb3S4R1G7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
H2afb3S4R1G7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H2afb3S4R1G7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
H2afb3S4R1G7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H2afb3S4R1G7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H2afb3S4R1G7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
H2afb3S4R1G7 Gm15546-201ENSMUST00000122095 826 ntBASIC17.68■□□□□ 0.42
H2afb3S4R1G7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
H2afb3S4R1G7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
H2afb3S4R1G7 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.68■□□□□ 0.42
H2afb3S4R1G7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
H2afb3S4R1G7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H2afb3S4R1G7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
H2afb3S4R1G7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
H2afb3S4R1G7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
H2afb3S4R1G7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
H2afb3S4R1G7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H2afb3S4R1G7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H2afb3S4R1G7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H2afb3S4R1G7 Gm43530-201ENSMUST00000195920 274 ntBASIC17.67■□□□□ 0.42
H2afb3S4R1G7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H2afb3S4R1G7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H2afb3S4R1G7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H2afb3S4R1G7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
H2afb3S4R1G7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
H2afb3S4R1G7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H2afb3S4R1G7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H2afb3S4R1G7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
H2afb3S4R1G7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
H2afb3S4R1G7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H2afb3S4R1G7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
H2afb3S4R1G7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H2afb3S4R1G7 Etf1-202ENSMUST00000180351 108 ntBASIC17.66■□□□□ 0.42
H2afb3S4R1G7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H2afb3S4R1G7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H2afb3S4R1G7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H2afb3S4R1G7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
H2afb3S4R1G7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
H2afb3S4R1G7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H2afb3S4R1G7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb3S4R1G7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb3S4R1G7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb3S4R1G7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb3S4R1G7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb3S4R1G7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb3S4R1G7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb3S4R1G7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb3S4R1G7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb3S4R1G7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb3S4R1G7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb3S4R1G7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb3S4R1G7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H2afb3S4R1G7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
H2afb3S4R1G7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
H2afb3S4R1G7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb3S4R1G7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.64■□□□□ 0.41
H2afb3S4R1G7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.64■□□□□ 0.41
H2afb3S4R1G7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb3S4R1G7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb3S4R1G7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
H2afb3S4R1G7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb3S4R1G7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.64■□□□□ 0.41
H2afb3S4R1G7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb3S4R1G7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb3S4R1G7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2afb3S4R1G7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb3S4R1G7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb3S4R1G7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
H2afb3S4R1G7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H2afb3S4R1G7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
H2afb3S4R1G7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.63■□□□□ 0.41
H2afb3S4R1G7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.63■□□□□ 0.41
H2afb3S4R1G7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
H2afb3S4R1G7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb3S4R1G7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
H2afb3S4R1G7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb3S4R1G7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H2afb3S4R1G7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
H2afb3S4R1G7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
H2afb3S4R1G7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
H2afb3S4R1G7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.61■□□□□ 0.41
H2afb3S4R1G7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
H2afb3S4R1G7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
H2afb3S4R1G7 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.61■□□□□ 0.41
H2afb3S4R1G7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
H2afb3S4R1G7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
H2afb3S4R1G7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
H2afb3S4R1G7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H2afb3S4R1G7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb3S4R1G7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb3S4R1G7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb3S4R1G7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb3S4R1G7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms