Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RpgrQ9R0X5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RpgrQ9R0X5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RpgrQ9R0X5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RpgrQ9R0X5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RpgrQ9R0X5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RpgrQ9R0X5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RpgrQ9R0X5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.87■□□□□ 0.77
RpgrQ9R0X5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RpgrQ9R0X5 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RpgrQ9R0X5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RpgrQ9R0X5 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RpgrQ9R0X5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RpgrQ9R0X5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.86■□□□□ 0.77
RpgrQ9R0X5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RpgrQ9R0X5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RpgrQ9R0X5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RpgrQ9R0X5 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RpgrQ9R0X5 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RpgrQ9R0X5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RpgrQ9R0X5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RpgrQ9R0X5 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RpgrQ9R0X5 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RpgrQ9R0X5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RpgrQ9R0X5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RpgrQ9R0X5 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RpgrQ9R0X5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RpgrQ9R0X5 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RpgrQ9R0X5 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RpgrQ9R0X5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RpgrQ9R0X5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RpgrQ9R0X5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RpgrQ9R0X5 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RpgrQ9R0X5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RpgrQ9R0X5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
RpgrQ9R0X5 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RpgrQ9R0X5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RpgrQ9R0X5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RpgrQ9R0X5 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
RpgrQ9R0X5 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RpgrQ9R0X5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RpgrQ9R0X5 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RpgrQ9R0X5 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RpgrQ9R0X5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.83■□□□□ 0.77
RpgrQ9R0X5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RpgrQ9R0X5 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.83■□□□□ 0.77
RpgrQ9R0X5 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.83■□□□□ 0.77
RpgrQ9R0X5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
RpgrQ9R0X5 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RpgrQ9R0X5 Gm9847-201ENSMUST00000052528 599 ntBASIC19.83■□□□□ 0.77
RpgrQ9R0X5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
RpgrQ9R0X5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RpgrQ9R0X5 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RpgrQ9R0X5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RpgrQ9R0X5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RpgrQ9R0X5 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.82■□□□□ 0.76
RpgrQ9R0X5 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RpgrQ9R0X5 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RpgrQ9R0X5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RpgrQ9R0X5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RpgrQ9R0X5 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RpgrQ9R0X5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RpgrQ9R0X5 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.81■□□□□ 0.76
RpgrQ9R0X5 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RpgrQ9R0X5 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.81■□□□□ 0.76
RpgrQ9R0X5 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RpgrQ9R0X5 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.81■□□□□ 0.76
RpgrQ9R0X5 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RpgrQ9R0X5 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RpgrQ9R0X5 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.8■□□□□ 0.76
RpgrQ9R0X5 Gm43530-201ENSMUST00000195920 274 ntBASIC19.8■□□□□ 0.76
RpgrQ9R0X5 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.8■□□□□ 0.76
RpgrQ9R0X5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RpgrQ9R0X5 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RpgrQ9R0X5 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.79■□□□□ 0.76
RpgrQ9R0X5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RpgrQ9R0X5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.79■□□□□ 0.76
RpgrQ9R0X5 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RpgrQ9R0X5 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RpgrQ9R0X5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RpgrQ9R0X5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.79■□□□□ 0.76
RpgrQ9R0X5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RpgrQ9R0X5 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RpgrQ9R0X5 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RpgrQ9R0X5 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RpgrQ9R0X5 Gm13241-201ENSMUST00000094493 780 ntBASIC19.79■□□□□ 0.76
RpgrQ9R0X5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.79■□□□□ 0.76
RpgrQ9R0X5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RpgrQ9R0X5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RpgrQ9R0X5 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.78■□□□□ 0.76
RpgrQ9R0X5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RpgrQ9R0X5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RpgrQ9R0X5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RpgrQ9R0X5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RpgrQ9R0X5 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RpgrQ9R0X5 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RpgrQ9R0X5 Golgb1-201ENSMUST00000023534 498 ntBASIC19.78■□□□□ 0.76
RpgrQ9R0X5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RpgrQ9R0X5 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RpgrQ9R0X5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms