Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Rnf4Q9QZS2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf4Q9QZS2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf4Q9QZS2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf4Q9QZS2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf4Q9QZS2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf4Q9QZS2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf4Q9QZS2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rnf4Q9QZS2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf4Q9QZS2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf4Q9QZS2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.87■□□□□ 0.77
Rnf4Q9QZS2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Rnf4Q9QZS2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf4Q9QZS2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rnf4Q9QZS2 Gm11687-201ENSMUST00000118911 886 ntBASIC19.87■□□□□ 0.77
Rnf4Q9QZS2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Rnf4Q9QZS2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rnf4Q9QZS2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Rnf4Q9QZS2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf4Q9QZS2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf4Q9QZS2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf4Q9QZS2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf4Q9QZS2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf4Q9QZS2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf4Q9QZS2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf4Q9QZS2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Rnf4Q9QZS2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf4Q9QZS2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf4Q9QZS2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf4Q9QZS2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf4Q9QZS2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf4Q9QZS2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf4Q9QZS2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf4Q9QZS2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf4Q9QZS2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf4Q9QZS2 Cap2-205ENSMUST00000225824 1634 ntBASIC19.85■□□□□ 0.77
Rnf4Q9QZS2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf4Q9QZS2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf4Q9QZS2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.85■□□□□ 0.77
Rnf4Q9QZS2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf4Q9QZS2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf4Q9QZS2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf4Q9QZS2 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.84■□□□□ 0.77
Rnf4Q9QZS2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rnf4Q9QZS2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf4Q9QZS2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Rnf4Q9QZS2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf4Q9QZS2 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.84■□□□□ 0.77
Rnf4Q9QZS2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf4Q9QZS2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf4Q9QZS2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf4Q9QZS2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf4Q9QZS2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf4Q9QZS2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf4Q9QZS2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf4Q9QZS2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.84■□□□□ 0.77
Rnf4Q9QZS2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf4Q9QZS2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf4Q9QZS2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Rnf4Q9QZS2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf4Q9QZS2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf4Q9QZS2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf4Q9QZS2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Rnf4Q9QZS2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf4Q9QZS2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf4Q9QZS2 Gm11175-201ENSMUST00000116172 543 ntBASIC19.82■□□□□ 0.76
Rnf4Q9QZS2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.82■□□□□ 0.76
Rnf4Q9QZS2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.82■□□□□ 0.76
Rnf4Q9QZS2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf4Q9QZS2 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.81■□□□□ 0.76
Rnf4Q9QZS2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf4Q9QZS2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf4Q9QZS2 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.81■□□□□ 0.76
Rnf4Q9QZS2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rnf4Q9QZS2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf4Q9QZS2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf4Q9QZS2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf4Q9QZS2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rnf4Q9QZS2 Rarb-207ENSMUST00000225921 2756 ntBASIC19.8■□□□□ 0.76
Rnf4Q9QZS2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.8■□□□□ 0.76
Rnf4Q9QZS2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf4Q9QZS2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.8■□□□□ 0.76
Rnf4Q9QZS2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf4Q9QZS2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf4Q9QZS2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Rnf4Q9QZS2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf4Q9QZS2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf4Q9QZS2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf4Q9QZS2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.79■□□□□ 0.76
Rnf4Q9QZS2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf4Q9QZS2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf4Q9QZS2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf4Q9QZS2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf4Q9QZS2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.79■□□□□ 0.76
Rnf4Q9QZS2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.79■□□□□ 0.76
Rnf4Q9QZS2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Rnf4Q9QZS2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Rnf4Q9QZS2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf4Q9QZS2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Rnf4Q9QZS2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms