Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SrfQ9JM73 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.73■□□□□ 0.59
SrfQ9JM73 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
SrfQ9JM73 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SrfQ9JM73 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SrfQ9JM73 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.72■□□□□ 0.59
SrfQ9JM73 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SrfQ9JM73 Gm10653-202ENSMUST00000139570 835 ntBASIC18.72■□□□□ 0.59
SrfQ9JM73 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SrfQ9JM73 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SrfQ9JM73 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SrfQ9JM73 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SrfQ9JM73 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.71■□□□□ 0.59
SrfQ9JM73 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SrfQ9JM73 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SrfQ9JM73 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SrfQ9JM73 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SrfQ9JM73 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SrfQ9JM73 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SrfQ9JM73 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.7■□□□□ 0.58
SrfQ9JM73 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SrfQ9JM73 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.7■□□□□ 0.58
SrfQ9JM73 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SrfQ9JM73 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SrfQ9JM73 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SrfQ9JM73 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SrfQ9JM73 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SrfQ9JM73 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SrfQ9JM73 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SrfQ9JM73 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SrfQ9JM73 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SrfQ9JM73 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SrfQ9JM73 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SrfQ9JM73 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.69■□□□□ 0.58
SrfQ9JM73 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.69■□□□□ 0.58
SrfQ9JM73 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.69■□□□□ 0.58
SrfQ9JM73 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SrfQ9JM73 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SrfQ9JM73 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SrfQ9JM73 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SrfQ9JM73 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SrfQ9JM73 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SrfQ9JM73 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SrfQ9JM73 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SrfQ9JM73 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SrfQ9JM73 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SrfQ9JM73 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SrfQ9JM73 Gm22240-201ENSMUST00000175225 82 ntBASIC18.68■□□□□ 0.58
SrfQ9JM73 Gm8520-201ENSMUST00000186517 868 ntBASIC18.68■□□□□ 0.58
SrfQ9JM73 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SrfQ9JM73 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SrfQ9JM73 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SrfQ9JM73 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SrfQ9JM73 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SrfQ9JM73 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SrfQ9JM73 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SrfQ9JM73 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SrfQ9JM73 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.67■□□□□ 0.58
SrfQ9JM73 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.67■□□□□ 0.58
SrfQ9JM73 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.67■□□□□ 0.58
SrfQ9JM73 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SrfQ9JM73 Gm6365-201ENSMUST00000054711 744 ntBASIC18.67■□□□□ 0.58
SrfQ9JM73 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SrfQ9JM73 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SrfQ9JM73 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.67■□□□□ 0.58
SrfQ9JM73 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SrfQ9JM73 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SrfQ9JM73 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SrfQ9JM73 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.66■□□□□ 0.58
SrfQ9JM73 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SrfQ9JM73 Gm5408-201ENSMUST00000197998 747 ntBASIC18.66■□□□□ 0.58
SrfQ9JM73 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SrfQ9JM73 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SrfQ9JM73 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SrfQ9JM73 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SrfQ9JM73 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
SrfQ9JM73 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SrfQ9JM73 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SrfQ9JM73 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.65■□□□□ 0.58
SrfQ9JM73 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SrfQ9JM73 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SrfQ9JM73 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SrfQ9JM73 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.65■□□□□ 0.58
SrfQ9JM73 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
SrfQ9JM73 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SrfQ9JM73 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SrfQ9JM73 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SrfQ9JM73 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SrfQ9JM73 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SrfQ9JM73 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SrfQ9JM73 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SrfQ9JM73 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SrfQ9JM73 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SrfQ9JM73 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SrfQ9JM73 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SrfQ9JM73 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.64■□□□□ 0.57
SrfQ9JM73 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.63■□□□□ 0.57
SrfQ9JM73 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SrfQ9JM73 Gm13148-201ENSMUST00000118892 745 ntBASIC18.63■□□□□ 0.57
SrfQ9JM73 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms