Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Scn5aQ9JJV9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn5aQ9JJV9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn5aQ9JJV9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.63■□□□□ 0.89
Scn5aQ9JJV9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn5aQ9JJV9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn5aQ9JJV9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn5aQ9JJV9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn5aQ9JJV9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn5aQ9JJV9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scn5aQ9JJV9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scn5aQ9JJV9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.62■□□□□ 0.89
Scn5aQ9JJV9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn5aQ9JJV9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Scn5aQ9JJV9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scn5aQ9JJV9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn5aQ9JJV9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.61■□□□□ 0.89
Scn5aQ9JJV9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Scn5aQ9JJV9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn5aQ9JJV9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Scn5aQ9JJV9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Scn5aQ9JJV9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn5aQ9JJV9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Scn5aQ9JJV9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn5aQ9JJV9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Scn5aQ9JJV9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn5aQ9JJV9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn5aQ9JJV9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn5aQ9JJV9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Scn5aQ9JJV9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn5aQ9JJV9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn5aQ9JJV9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.6■□□□□ 0.89
Scn5aQ9JJV9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn5aQ9JJV9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Scn5aQ9JJV9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.6■□□□□ 0.89
Scn5aQ9JJV9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Scn5aQ9JJV9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.6■□□□□ 0.89
Scn5aQ9JJV9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn5aQ9JJV9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Scn5aQ9JJV9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn5aQ9JJV9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn5aQ9JJV9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn5aQ9JJV9 Gm13146-201ENSMUST00000118508 780 ntBASIC20.59■□□□□ 0.89
Scn5aQ9JJV9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scn5aQ9JJV9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn5aQ9JJV9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scn5aQ9JJV9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn5aQ9JJV9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn5aQ9JJV9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.58■□□□□ 0.89
Scn5aQ9JJV9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
Scn5aQ9JJV9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.58■□□□□ 0.89
Scn5aQ9JJV9 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.58■□□□□ 0.89
Scn5aQ9JJV9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn5aQ9JJV9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn5aQ9JJV9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Scn5aQ9JJV9 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.57■□□□□ 0.88
Scn5aQ9JJV9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn5aQ9JJV9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.57■□□□□ 0.88
Scn5aQ9JJV9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn5aQ9JJV9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Scn5aQ9JJV9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scn5aQ9JJV9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn5aQ9JJV9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Scn5aQ9JJV9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Scn5aQ9JJV9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scn5aQ9JJV9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scn5aQ9JJV9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scn5aQ9JJV9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Scn5aQ9JJV9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn5aQ9JJV9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn5aQ9JJV9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn5aQ9JJV9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn5aQ9JJV9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scn5aQ9JJV9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Scn5aQ9JJV9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scn5aQ9JJV9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn5aQ9JJV9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Scn5aQ9JJV9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn5aQ9JJV9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn5aQ9JJV9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn5aQ9JJV9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn5aQ9JJV9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn5aQ9JJV9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scn5aQ9JJV9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn5aQ9JJV9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scn5aQ9JJV9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.54■□□□□ 0.88
Scn5aQ9JJV9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn5aQ9JJV9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Scn5aQ9JJV9 Gm6211-202ENSMUST00000167849 925 ntBASIC20.53■□□□□ 0.88
Scn5aQ9JJV9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.53■□□□□ 0.88
Scn5aQ9JJV9 Gm38205-201ENSMUST00000192243 258 ntBASIC20.53■□□□□ 0.88
Scn5aQ9JJV9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scn5aQ9JJV9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Scn5aQ9JJV9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn5aQ9JJV9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn5aQ9JJV9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scn5aQ9JJV9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn5aQ9JJV9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn5aQ9JJV9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn5aQ9JJV9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms