Protein–RNA interactions for Protein: Q9JJ80

Rpf2, Ribosome production factor 2 homolog, mousemouse

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf2Q9JJ80 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rpf2Q9JJ80 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.99■□□□□ 0.95
Rpf2Q9JJ80 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpf2Q9JJ80 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Rpf2Q9JJ80 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.99■□□□□ 0.95
Rpf2Q9JJ80 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Rpf2Q9JJ80 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpf2Q9JJ80 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Rpf2Q9JJ80 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpf2Q9JJ80 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpf2Q9JJ80 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rpf2Q9JJ80 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rpf2Q9JJ80 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpf2Q9JJ80 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpf2Q9JJ80 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpf2Q9JJ80 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpf2Q9JJ80 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rpf2Q9JJ80 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rpf2Q9JJ80 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rpf2Q9JJ80 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpf2Q9JJ80 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpf2Q9JJ80 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Rpf2Q9JJ80 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Rpf2Q9JJ80 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.97■□□□□ 0.95
Rpf2Q9JJ80 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpf2Q9JJ80 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpf2Q9JJ80 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpf2Q9JJ80 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpf2Q9JJ80 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpf2Q9JJ80 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpf2Q9JJ80 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpf2Q9JJ80 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpf2Q9JJ80 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.96■□□□□ 0.95
Rpf2Q9JJ80 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpf2Q9JJ80 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.96■□□□□ 0.95
Rpf2Q9JJ80 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpf2Q9JJ80 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Rpf2Q9JJ80 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Rpf2Q9JJ80 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpf2Q9JJ80 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpf2Q9JJ80 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Rpf2Q9JJ80 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rpf2Q9JJ80 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rpf2Q9JJ80 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.95■□□□□ 0.94
Rpf2Q9JJ80 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rpf2Q9JJ80 Golph3-205ENSMUST00000228671 2842 ntBASIC20.95■□□□□ 0.94
Rpf2Q9JJ80 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.95■□□□□ 0.94
Rpf2Q9JJ80 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpf2Q9JJ80 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpf2Q9JJ80 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.94■□□□□ 0.94
Rpf2Q9JJ80 Gm9870-201ENSMUST00000063874 645 ntBASIC20.94■□□□□ 0.94
Rpf2Q9JJ80 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Rpf2Q9JJ80 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpf2Q9JJ80 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpf2Q9JJ80 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rpf2Q9JJ80 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Rpf2Q9JJ80 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Rpf2Q9JJ80 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpf2Q9JJ80 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpf2Q9JJ80 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.93■□□□□ 0.94
Rpf2Q9JJ80 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpf2Q9JJ80 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpf2Q9JJ80 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpf2Q9JJ80 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.93■□□□□ 0.94
Rpf2Q9JJ80 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Rpf2Q9JJ80 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpf2Q9JJ80 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpf2Q9JJ80 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpf2Q9JJ80 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpf2Q9JJ80 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rpf2Q9JJ80 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpf2Q9JJ80 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rpf2Q9JJ80 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rpf2Q9JJ80 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rpf2Q9JJ80 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rpf2Q9JJ80 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rpf2Q9JJ80 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rpf2Q9JJ80 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpf2Q9JJ80 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Rpf2Q9JJ80 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.91■□□□□ 0.94
Rpf2Q9JJ80 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpf2Q9JJ80 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Rpf2Q9JJ80 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpf2Q9JJ80 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpf2Q9JJ80 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpf2Q9JJ80 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpf2Q9JJ80 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpf2Q9JJ80 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpf2Q9JJ80 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpf2Q9JJ80 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rpf2Q9JJ80 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rpf2Q9JJ80 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rpf2Q9JJ80 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpf2Q9JJ80 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpf2Q9JJ80 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rpf2Q9JJ80 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Rpf2Q9JJ80 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpf2Q9JJ80 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpf2Q9JJ80 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpf2Q9JJ80 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms