Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
Tubb3Q9ERD7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tubb3Q9ERD7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tubb3Q9ERD7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tubb3Q9ERD7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tubb3Q9ERD7 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.58■□□□□ 0.72
Tubb3Q9ERD7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tubb3Q9ERD7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
Tubb3Q9ERD7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tubb3Q9ERD7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tubb3Q9ERD7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Tubb3Q9ERD7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tubb3Q9ERD7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tubb3Q9ERD7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tubb3Q9ERD7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tubb3Q9ERD7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tubb3Q9ERD7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
Tubb3Q9ERD7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tubb3Q9ERD7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.57■□□□□ 0.72
Tubb3Q9ERD7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tubb3Q9ERD7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tubb3Q9ERD7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tubb3Q9ERD7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tubb3Q9ERD7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tubb3Q9ERD7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tubb3Q9ERD7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tubb3Q9ERD7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tubb3Q9ERD7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Tubb3Q9ERD7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Tubb3Q9ERD7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tubb3Q9ERD7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tubb3Q9ERD7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tubb3Q9ERD7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tubb3Q9ERD7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.55■□□□□ 0.72
Tubb3Q9ERD7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.55■□□□□ 0.72
Tubb3Q9ERD7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tubb3Q9ERD7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.55■□□□□ 0.72
Tubb3Q9ERD7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tubb3Q9ERD7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tubb3Q9ERD7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tubb3Q9ERD7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tubb3Q9ERD7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tubb3Q9ERD7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tubb3Q9ERD7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tubb3Q9ERD7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tubb3Q9ERD7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tubb3Q9ERD7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tubb3Q9ERD7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tubb3Q9ERD7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tubb3Q9ERD7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tubb3Q9ERD7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tubb3Q9ERD7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.54■□□□□ 0.72
Tubb3Q9ERD7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.54■□□□□ 0.72
Tubb3Q9ERD7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.54■□□□□ 0.72
Tubb3Q9ERD7 Gm45417-201ENSMUST00000209533 758 ntBASIC19.54■□□□□ 0.72
Tubb3Q9ERD7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tubb3Q9ERD7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tubb3Q9ERD7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tubb3Q9ERD7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tubb3Q9ERD7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tubb3Q9ERD7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tubb3Q9ERD7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tubb3Q9ERD7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tubb3Q9ERD7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tubb3Q9ERD7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Tubb3Q9ERD7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tubb3Q9ERD7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Tubb3Q9ERD7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tubb3Q9ERD7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.53■□□□□ 0.72
Tubb3Q9ERD7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tubb3Q9ERD7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tubb3Q9ERD7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.53■□□□□ 0.72
Tubb3Q9ERD7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.53■□□□□ 0.72
Tubb3Q9ERD7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Tubb3Q9ERD7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tubb3Q9ERD7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tubb3Q9ERD7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tubb3Q9ERD7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tubb3Q9ERD7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tubb3Q9ERD7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.52■□□□□ 0.72
Tubb3Q9ERD7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Tubb3Q9ERD7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tubb3Q9ERD7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Tubb3Q9ERD7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.52■□□□□ 0.72
Tubb3Q9ERD7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Tubb3Q9ERD7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Tubb3Q9ERD7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tubb3Q9ERD7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tubb3Q9ERD7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tubb3Q9ERD7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.51■□□□□ 0.71
Tubb3Q9ERD7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tubb3Q9ERD7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Tubb3Q9ERD7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tubb3Q9ERD7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tubb3Q9ERD7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.5■□□□□ 0.71
Tubb3Q9ERD7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tubb3Q9ERD7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tubb3Q9ERD7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tubb3Q9ERD7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tubb3Q9ERD7 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms