Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpne8Q9DC53 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cpne8Q9DC53 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpne8Q9DC53 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne8Q9DC53 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne8Q9DC53 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne8Q9DC53 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.62■□□□□ 0.89
Cpne8Q9DC53 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Cpne8Q9DC53 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne8Q9DC53 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne8Q9DC53 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne8Q9DC53 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne8Q9DC53 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne8Q9DC53 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cpne8Q9DC53 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpne8Q9DC53 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpne8Q9DC53 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cpne8Q9DC53 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Cpne8Q9DC53 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.61■□□□□ 0.89
Cpne8Q9DC53 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpne8Q9DC53 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpne8Q9DC53 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpne8Q9DC53 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.61■□□□□ 0.89
Cpne8Q9DC53 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cpne8Q9DC53 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpne8Q9DC53 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpne8Q9DC53 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.6■□□□□ 0.89
Cpne8Q9DC53 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpne8Q9DC53 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Cpne8Q9DC53 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpne8Q9DC53 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Cpne8Q9DC53 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cpne8Q9DC53 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.59■□□□□ 0.89
Cpne8Q9DC53 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.59■□□□□ 0.89
Cpne8Q9DC53 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpne8Q9DC53 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpne8Q9DC53 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.59■□□□□ 0.89
Cpne8Q9DC53 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cpne8Q9DC53 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpne8Q9DC53 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.58■□□□□ 0.89
Cpne8Q9DC53 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.58■□□□□ 0.89
Cpne8Q9DC53 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpne8Q9DC53 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpne8Q9DC53 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpne8Q9DC53 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cpne8Q9DC53 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpne8Q9DC53 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cpne8Q9DC53 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cpne8Q9DC53 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cpne8Q9DC53 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpne8Q9DC53 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpne8Q9DC53 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpne8Q9DC53 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.57■□□□□ 0.88
Cpne8Q9DC53 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.57■□□□□ 0.88
Cpne8Q9DC53 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.57■□□□□ 0.88
Cpne8Q9DC53 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpne8Q9DC53 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpne8Q9DC53 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.57■□□□□ 0.88
Cpne8Q9DC53 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpne8Q9DC53 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.56■□□□□ 0.88
Cpne8Q9DC53 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne8Q9DC53 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.56■□□□□ 0.88
Cpne8Q9DC53 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne8Q9DC53 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.56■□□□□ 0.88
Cpne8Q9DC53 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne8Q9DC53 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne8Q9DC53 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.56■□□□□ 0.88
Cpne8Q9DC53 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne8Q9DC53 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne8Q9DC53 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne8Q9DC53 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne8Q9DC53 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne8Q9DC53 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cpne8Q9DC53 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpne8Q9DC53 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cpne8Q9DC53 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpne8Q9DC53 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpne8Q9DC53 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cpne8Q9DC53 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Cpne8Q9DC53 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpne8Q9DC53 Golgb1-201ENSMUST00000023534 498 ntBASIC20.55■□□□□ 0.88
Cpne8Q9DC53 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpne8Q9DC53 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.55■□□□□ 0.88
Cpne8Q9DC53 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cpne8Q9DC53 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpne8Q9DC53 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cpne8Q9DC53 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpne8Q9DC53 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Cpne8Q9DC53 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cpne8Q9DC53 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.54■□□□□ 0.88
Cpne8Q9DC53 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpne8Q9DC53 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Cpne8Q9DC53 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.53■□□□□ 0.88
Cpne8Q9DC53 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpne8Q9DC53 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpne8Q9DC53 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpne8Q9DC53 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cpne8Q9DC53 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpne8Q9DC53 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Cpne8Q9DC53 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms