Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nop56Q9D6Z1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nop56Q9D6Z1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.28■□□□□ 0.84
Nop56Q9D6Z1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Nop56Q9D6Z1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nop56Q9D6Z1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Nop56Q9D6Z1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Nop56Q9D6Z1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nop56Q9D6Z1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nop56Q9D6Z1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nop56Q9D6Z1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nop56Q9D6Z1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nop56Q9D6Z1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nop56Q9D6Z1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nop56Q9D6Z1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.27■□□□□ 0.84
Nop56Q9D6Z1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nop56Q9D6Z1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nop56Q9D6Z1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.27■□□□□ 0.84
Nop56Q9D6Z1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.27■□□□□ 0.84
Nop56Q9D6Z1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nop56Q9D6Z1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nop56Q9D6Z1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Nop56Q9D6Z1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.26■□□□□ 0.83
Nop56Q9D6Z1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nop56Q9D6Z1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nop56Q9D6Z1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Nop56Q9D6Z1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nop56Q9D6Z1 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.26■□□□□ 0.83
Nop56Q9D6Z1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nop56Q9D6Z1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nop56Q9D6Z1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Nop56Q9D6Z1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nop56Q9D6Z1 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.25■□□□□ 0.83
Nop56Q9D6Z1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nop56Q9D6Z1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Nop56Q9D6Z1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nop56Q9D6Z1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nop56Q9D6Z1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nop56Q9D6Z1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nop56Q9D6Z1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nop56Q9D6Z1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nop56Q9D6Z1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nop56Q9D6Z1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nop56Q9D6Z1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nop56Q9D6Z1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nop56Q9D6Z1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
Nop56Q9D6Z1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nop56Q9D6Z1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nop56Q9D6Z1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.24■□□□□ 0.83
Nop56Q9D6Z1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nop56Q9D6Z1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nop56Q9D6Z1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nop56Q9D6Z1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nop56Q9D6Z1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nop56Q9D6Z1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nop56Q9D6Z1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nop56Q9D6Z1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nop56Q9D6Z1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Nop56Q9D6Z1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nop56Q9D6Z1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nop56Q9D6Z1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nop56Q9D6Z1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nop56Q9D6Z1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.22■□□□□ 0.83
Nop56Q9D6Z1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nop56Q9D6Z1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nop56Q9D6Z1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nop56Q9D6Z1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.22■□□□□ 0.83
Nop56Q9D6Z1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nop56Q9D6Z1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nop56Q9D6Z1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nop56Q9D6Z1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nop56Q9D6Z1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Nop56Q9D6Z1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.21■□□□□ 0.83
Nop56Q9D6Z1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nop56Q9D6Z1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.21■□□□□ 0.83
Nop56Q9D6Z1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
Nop56Q9D6Z1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nop56Q9D6Z1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nop56Q9D6Z1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nop56Q9D6Z1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nop56Q9D6Z1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nop56Q9D6Z1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.2■□□□□ 0.82
Nop56Q9D6Z1 Gm45444-201ENSMUST00000211394 898 ntBASIC20.2■□□□□ 0.82
Nop56Q9D6Z1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Nop56Q9D6Z1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nop56Q9D6Z1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Nop56Q9D6Z1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nop56Q9D6Z1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nop56Q9D6Z1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nop56Q9D6Z1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nop56Q9D6Z1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nop56Q9D6Z1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop56Q9D6Z1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop56Q9D6Z1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop56Q9D6Z1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Nop56Q9D6Z1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop56Q9D6Z1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.19■□□□□ 0.82
Nop56Q9D6Z1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Nop56Q9D6Z1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Nop56Q9D6Z1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms