Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chaf1bQ9D0N7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Chaf1bQ9D0N7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chaf1bQ9D0N7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chaf1bQ9D0N7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chaf1bQ9D0N7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Chaf1bQ9D0N7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.5■□□□□ 0.55
Chaf1bQ9D0N7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chaf1bQ9D0N7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chaf1bQ9D0N7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chaf1bQ9D0N7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chaf1bQ9D0N7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chaf1bQ9D0N7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chaf1bQ9D0N7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chaf1bQ9D0N7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
Chaf1bQ9D0N7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chaf1bQ9D0N7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chaf1bQ9D0N7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Chaf1bQ9D0N7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chaf1bQ9D0N7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chaf1bQ9D0N7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chaf1bQ9D0N7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chaf1bQ9D0N7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Chaf1bQ9D0N7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.49■□□□□ 0.55
Chaf1bQ9D0N7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chaf1bQ9D0N7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Chaf1bQ9D0N7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chaf1bQ9D0N7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chaf1bQ9D0N7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chaf1bQ9D0N7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Chaf1bQ9D0N7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chaf1bQ9D0N7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chaf1bQ9D0N7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chaf1bQ9D0N7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chaf1bQ9D0N7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chaf1bQ9D0N7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.48■□□□□ 0.55
Chaf1bQ9D0N7 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.48■□□□□ 0.55
Chaf1bQ9D0N7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chaf1bQ9D0N7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chaf1bQ9D0N7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chaf1bQ9D0N7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chaf1bQ9D0N7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1bQ9D0N7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1bQ9D0N7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1bQ9D0N7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1bQ9D0N7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1bQ9D0N7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Chaf1bQ9D0N7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1bQ9D0N7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1bQ9D0N7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1bQ9D0N7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chaf1bQ9D0N7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chaf1bQ9D0N7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Chaf1bQ9D0N7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chaf1bQ9D0N7 Mir6538-201ENSMUST00000183713 110 ntBASIC18.46■□□□□ 0.55
Chaf1bQ9D0N7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chaf1bQ9D0N7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chaf1bQ9D0N7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chaf1bQ9D0N7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chaf1bQ9D0N7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chaf1bQ9D0N7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Chaf1bQ9D0N7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Chaf1bQ9D0N7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chaf1bQ9D0N7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chaf1bQ9D0N7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chaf1bQ9D0N7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chaf1bQ9D0N7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chaf1bQ9D0N7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chaf1bQ9D0N7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Chaf1bQ9D0N7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
Chaf1bQ9D0N7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chaf1bQ9D0N7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Chaf1bQ9D0N7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chaf1bQ9D0N7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Chaf1bQ9D0N7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Chaf1bQ9D0N7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chaf1bQ9D0N7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chaf1bQ9D0N7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chaf1bQ9D0N7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.44■□□□□ 0.54
Chaf1bQ9D0N7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Chaf1bQ9D0N7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chaf1bQ9D0N7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chaf1bQ9D0N7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chaf1bQ9D0N7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chaf1bQ9D0N7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chaf1bQ9D0N7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chaf1bQ9D0N7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chaf1bQ9D0N7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chaf1bQ9D0N7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chaf1bQ9D0N7 Golph3-205ENSMUST00000228671 2842 ntBASIC18.43■□□□□ 0.54
Chaf1bQ9D0N7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chaf1bQ9D0N7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chaf1bQ9D0N7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chaf1bQ9D0N7 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.43■□□□□ 0.54
Chaf1bQ9D0N7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Chaf1bQ9D0N7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chaf1bQ9D0N7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Chaf1bQ9D0N7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chaf1bQ9D0N7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chaf1bQ9D0N7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms