Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Snf8Q9CZ28 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Snf8Q9CZ28 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Snf8Q9CZ28 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Snf8Q9CZ28 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Snf8Q9CZ28 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Snf8Q9CZ28 Gm40881-201ENSMUST00000223397 166 ntBASIC20.28■□□□□ 0.84
Snf8Q9CZ28 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Snf8Q9CZ28 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Snf8Q9CZ28 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Snf8Q9CZ28 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.28■□□□□ 0.84
Snf8Q9CZ28 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Snf8Q9CZ28 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Snf8Q9CZ28 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Snf8Q9CZ28 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Snf8Q9CZ28 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Snf8Q9CZ28 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Snf8Q9CZ28 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Snf8Q9CZ28 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Snf8Q9CZ28 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Snf8Q9CZ28 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.27■□□□□ 0.84
Snf8Q9CZ28 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Snf8Q9CZ28 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.26■□□□□ 0.83
Snf8Q9CZ28 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Snf8Q9CZ28 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Snf8Q9CZ28 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Snf8Q9CZ28 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Snf8Q9CZ28 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Snf8Q9CZ28 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Snf8Q9CZ28 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Snf8Q9CZ28 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.26■□□□□ 0.83
Snf8Q9CZ28 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Snf8Q9CZ28 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Snf8Q9CZ28 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.26■□□□□ 0.83
Snf8Q9CZ28 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Snf8Q9CZ28 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Snf8Q9CZ28 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Snf8Q9CZ28 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.25■□□□□ 0.83
Snf8Q9CZ28 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Snf8Q9CZ28 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.25■□□□□ 0.83
Snf8Q9CZ28 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.25■□□□□ 0.83
Snf8Q9CZ28 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Snf8Q9CZ28 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Snf8Q9CZ28 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Snf8Q9CZ28 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Snf8Q9CZ28 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Snf8Q9CZ28 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Snf8Q9CZ28 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Snf8Q9CZ28 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Snf8Q9CZ28 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Snf8Q9CZ28 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Snf8Q9CZ28 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Snf8Q9CZ28 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.24■□□□□ 0.83
Snf8Q9CZ28 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Snf8Q9CZ28 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Snf8Q9CZ28 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Snf8Q9CZ28 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.23■□□□□ 0.83
Snf8Q9CZ28 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Snf8Q9CZ28 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Snf8Q9CZ28 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.23■□□□□ 0.83
Snf8Q9CZ28 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Snf8Q9CZ28 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Snf8Q9CZ28 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Snf8Q9CZ28 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Snf8Q9CZ28 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Snf8Q9CZ28 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Snf8Q9CZ28 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Snf8Q9CZ28 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Snf8Q9CZ28 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.22■□□□□ 0.83
Snf8Q9CZ28 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.22■□□□□ 0.83
Snf8Q9CZ28 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Snf8Q9CZ28 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Snf8Q9CZ28 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Snf8Q9CZ28 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Snf8Q9CZ28 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Snf8Q9CZ28 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Snf8Q9CZ28 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Snf8Q9CZ28 Gm43530-201ENSMUST00000195920 274 ntBASIC20.21■□□□□ 0.83
Snf8Q9CZ28 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Snf8Q9CZ28 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Snf8Q9CZ28 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Snf8Q9CZ28 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Snf8Q9CZ28 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Snf8Q9CZ28 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Snf8Q9CZ28 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Snf8Q9CZ28 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.2■□□□□ 0.82
Snf8Q9CZ28 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Snf8Q9CZ28 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Snf8Q9CZ28 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Snf8Q9CZ28 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Snf8Q9CZ28 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Snf8Q9CZ28 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Snf8Q9CZ28 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Snf8Q9CZ28 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.19■□□□□ 0.82
Snf8Q9CZ28 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Snf8Q9CZ28 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Snf8Q9CZ28 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Snf8Q9CZ28 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Snf8Q9CZ28 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Snf8Q9CZ28 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms