Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Chd1lQ9CXF7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Chd1lQ9CXF7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Chd1lQ9CXF7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Chd1lQ9CXF7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Chd1lQ9CXF7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Chd1lQ9CXF7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.15
Chd1lQ9CXF7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Chd1lQ9CXF7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Chd1lQ9CXF7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Chd1lQ9CXF7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Chd1lQ9CXF7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.26■■□□□ 1.15
Chd1lQ9CXF7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.26■■□□□ 1.15
Chd1lQ9CXF7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Chd1lQ9CXF7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Chd1lQ9CXF7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Chd1lQ9CXF7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Chd1lQ9CXF7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Chd1lQ9CXF7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Chd1lQ9CXF7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Chd1lQ9CXF7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Chd1lQ9CXF7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.25■■□□□ 1.15
Chd1lQ9CXF7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Chd1lQ9CXF7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Chd1lQ9CXF7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Chd1lQ9CXF7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Chd1lQ9CXF7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Chd1lQ9CXF7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC22.25■■□□□ 1.15
Chd1lQ9CXF7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC22.25■■□□□ 1.15
Chd1lQ9CXF7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
Chd1lQ9CXF7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chd1lQ9CXF7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chd1lQ9CXF7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Chd1lQ9CXF7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chd1lQ9CXF7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Chd1lQ9CXF7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chd1lQ9CXF7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chd1lQ9CXF7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Chd1lQ9CXF7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chd1lQ9CXF7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chd1lQ9CXF7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chd1lQ9CXF7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Chd1lQ9CXF7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Chd1lQ9CXF7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Chd1lQ9CXF7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Chd1lQ9CXF7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Chd1lQ9CXF7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Chd1lQ9CXF7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Chd1lQ9CXF7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Chd1lQ9CXF7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Chd1lQ9CXF7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Chd1lQ9CXF7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Chd1lQ9CXF7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Chd1lQ9CXF7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Chd1lQ9CXF7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Chd1lQ9CXF7 Rarb-207ENSMUST00000225921 2756 ntBASIC22.22■■□□□ 1.15
Chd1lQ9CXF7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Chd1lQ9CXF7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Chd1lQ9CXF7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Chd1lQ9CXF7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Chd1lQ9CXF7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Chd1lQ9CXF7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC22.21■■□□□ 1.15
Chd1lQ9CXF7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chd1lQ9CXF7 Gm38342-201ENSMUST00000195710 2980 ntBASIC22.21■■□□□ 1.15
Chd1lQ9CXF7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chd1lQ9CXF7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chd1lQ9CXF7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chd1lQ9CXF7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Chd1lQ9CXF7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.21■■□□□ 1.15
Chd1lQ9CXF7 Gm12366-201ENSMUST00000121722 873 ntBASIC22.21■■□□□ 1.15
Chd1lQ9CXF7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.21■■□□□ 1.15
Chd1lQ9CXF7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chd1lQ9CXF7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.21■■□□□ 1.15
Chd1lQ9CXF7 Gm5786-201ENSMUST00000085368 882 ntBASIC22.21■■□□□ 1.15
Chd1lQ9CXF7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chd1lQ9CXF7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chd1lQ9CXF7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Chd1lQ9CXF7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Chd1lQ9CXF7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chd1lQ9CXF7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chd1lQ9CXF7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Chd1lQ9CXF7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Chd1lQ9CXF7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chd1lQ9CXF7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Chd1lQ9CXF7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Chd1lQ9CXF7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Chd1lQ9CXF7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Chd1lQ9CXF7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Chd1lQ9CXF7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Chd1lQ9CXF7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Chd1lQ9CXF7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Chd1lQ9CXF7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Chd1lQ9CXF7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Chd1lQ9CXF7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Chd1lQ9CXF7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Chd1lQ9CXF7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.19■■□□□ 1.14
Chd1lQ9CXF7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Chd1lQ9CXF7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Chd1lQ9CXF7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Chd1lQ9CXF7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms